Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g04047 ATGGCCACCACCGCCACCACCACAACCACAACCACCACCACCATCTTCTCCTTCTTCCTTCTCTTCATTGCCTTTTTCAAAACCCTAACCCTAAATCCCTCAATTTCTCCATCACCACCACAATCTTCAACTCCAAATTACATCATTGGATTCACTCAATACAAAACCGCAGACCACCACCGTGCTTATCTTGAATCCAATCTCCGATCAAAAGGGTGGCAATGGATTGTAAGAAACAACCCTGCAGCTAAATTCCCCACCGATTTTGGCCTTGTTTCGGTTCATGAATTGGGGATTATTGAAGAAATTAAGAAATTAGGGTTAGTTAAGTATGTTAGTTTGGATATGAGTTATAAAAGAGGTTTGATGAAACATGAGAGTGATAAAGTTGGTTCCTTTTTTGATGGGAATAAAAAACCTGGGAAGATCTTTACTAAGATGTCGTTTTGTGAAGCAGAAGAAGAACAAGAACAAGATACTGTCAATAACAATCACAATCATAATAGTTCCATCAAATGGGGGAGACAATTGTTGTTCCAGAGATCACAAGTTACTTCTATGTTTGGGGCGGAAGAACTGTGGACGAAAGGGCACACTGGTGCAAAGGTCAAGATGGCCATATTTGATACTGGCATTCGTGCTGATCACCCTCATTTCCGTAACATCAAGGAGCGTACAAATTGGACCAACGAGGATACATTAAATGACAATCTTGGACATGGGACTTTCGTTGCTGGTGTTGTTGCCGGTATGGATGCCGAGTGCTTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCACAGGTGTCATATACCTCTTGGTTCCTTGATGCCTTTAACTATGCAATTGCAACCAATATGGATGTGCTCAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCATTTGTGGAAAAGATATGGGAGATAACAGCCAATAACATAATAATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAATAATCCAGCAGATCAAAGTGACGTGATTGGTGTTGGCGGTATTGACTATAGTGACCATATAGCGTCCTTTTCCTCACGTGGCATGAGTACATGGGAACTTCCACACGGTTATGGCCGTGTGAAGCCAGATGTAGTTGCATATGGACGAGACATAATGGGATCAAAGATTAGTTCGGGTTGTAAAAGTTTATCAGGAACCAGTGTTGCGAGTCCTGTAGTTGCTGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCTGAACCTGATCGCAAAAATCTCTTAAACCCAGCAAGCATGAAACAAGCATTGGTCGAGGGTGCAGCAAAACTTGCTGGGCCTAACATGTACGAGCAGGGTGCTGGCAGAGTCGATCTGTTAGAATCATATGAGATTCTTAAGAGCTACAAACCAAGGGCAAGCATCTTTCCCAGTCTTCTTGATTACACGGATTGTCCTTATTCATGGCCCTTTTGTCGTCAACCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCAGCATTTTAAATGGAATGGGTGTTATTGGCTACGTCGAAAGTCCACCAATATGGCATCCTTTTGAAGAAGTAGGGAATCTTCTAAGCATTCATTTTACATATTCTGAGGTCATCTGGCCTTGGACTGGTTATTTGGCCATTCATTTACAAATCAAGGAAGAAGGTTCACAATTTTCCGGTAACATTGAAGGTAATGTGACTCTTAGGGTTTCCAGTCCTCCAGCTCAAGGAGAAAGGCACCCTCGAATTAGCACATGTGTGCTTCAATTGAAGTTAAAAGTGGTGCCGACACCGCCACGAGCAAAACGAATTTTGTGGGATCAGTTTCACAATATAAAATATCCTCCAGGTTATATTCCCAGAGATTCGTTGGATGTTCGTAATGACATTCTTGACTGGCATGGGGATCATCTACATACAAATTTTCACATAATGTTCAACATGTTACGAGACTCCGGTTACTATGTTGAAACACTTGGTTCTCCTCTTACCTGCTTTGATGCTCGACACTACGGAACACTTCTTTTGGTCGATCTTGAAGAAGAGTACTTTCCCGAGGAGATTGAAAAGTTGAGAGACGATGTTATAAATACTGGATTGGGATTAGCTGTCTTTGCTGAGTGGTACAATGTAGATACCATGGTAAAGATGAGATTCTTTGACGATAATACCCGGAGTTGGTGGACCCCAGTCACCGGAGGTGCTAATAATCCTGCTCTTAATGATCTTTTGGCTCCATTTGGAATTGCTTTTGGAGATAAGATTCTGAGCGGTGATTTTTCACTTTTCGGTGAGGAGAATCGATACGCATCTGGAACAGATATAGTGAGGTTTCCAAGGGGTGGTTATGTACATAGCTTTCCTTTCTCAGATAGTTCAGAAAGTGGAGCCACTCAGAATGTTTTGCTTACTTCTAGCACCACCAAGGCAGATTCTCCGATTCTTGGTCTAACAGTGATGGGTGAAGGTCGCATTGCTGTGTATGGTGACTCCAACTGTTTGGACAGCAGCCATATGGTGACTAACTGTTTTACACTTCTGAGGAAAATGCTCGATTTTACTAGCGAGAATGTTAGAGATCCAGTGCTTTTCTCTAATTCAAATAAACAAGTCGCTCCCTTATATGAAGACGACAATCAGTTACCATCTCGCAGAACTGATGTAAATTTCTCTTCATATTCAGCTGTTGTGGGGAAGGACTTGATCTGCAGGACCGACTCAAGGTTCGAAATATGGGGAACTAAAGGCTACAGTTTGCAAGTCAGAGGAAGAAACAGAAGATTGCCTGGTTATCCTGTTATTGATCTCGGGAATGGTTTAAATTCAACCTTTGATGCTTCTAACATTAGGCGTCGAAAGGTAACTTTGAGAAATAAAGACGACTCTCTCAGGAATAGATATTTAGGCCTGTTCTATGGAGATGAGCCTGATGCACCTATGTTGGTTGGTAGTCACTGGCTTATTCCTGCTGTTGTTGCAGCAACTGGTATTTTACTATTGAGTTTTTGGCGCATTCGCCAAAAGAGACGTCGAAGAAGGAAAGGATCATCAAGCTCTGGTAGATTGACCAATTTATAG 3111 0.4217 MATTATTTTTTTTTIFSFFLLFIAFFKTLTLNPSISPSPPQSSTPNYIIGFTQYKTADHHRAYLESNLRSKGWQWIVRNNPAAKFPTDFGLVSVHELGIIEEIKKLGLVKYVSLDMSYKRGLMKHESDKVGSFFDGNKKPGKIFTKMSFCEAEEEQEQDTVNNNHNHNSSIKWGRQLLFQRSQVTSMFGAEELWTKGHTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVVAGMDAECFGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISSGCKSLSGTSVASPVVAGVVCLLVSVIPEPDRKNLLNPASMKQALVEGAAKLAGPNMYEQGAGRVDLLESYEILKSYKPRASIFPSLLDYTDCPYSWPFCRQPLYAGAMPVIFNASILNGMGVIGYVESPPIWHPFEEVGNLLSIHFTYSEVIWPWTGYLAIHLQIKEEGSQFSGNIEGNVTLRVSSPPAQGERHPRISTCVLQLKLKVVPTPPRAKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDSGYYVETLGSPLTCFDARHYGTLLLVDLEEEYFPEEIEKLRDDVINTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANNPALNDLLAPFGIAFGDKILSGDFSLFGEENRYASGTDIVRFPRGGYVHSFPFSDSSESGATQNVLLTSSTTKADSPILGLTVMGEGRIAVYGDSNCLDSSHMVTNCFTLLRKMLDFTSENVRDPVLFSNSNKQVAPLYEDDNQLPSRRTDVNFSSYSAVVGKDLICRTDSRFEIWGTKGYSLQVRGRNRRLPGYPVIDLGNGLNSTFDASNIRRRKVTLRNKDDSLRNRYLGLFYGDEPDAPMLVGSHWLIPAVVAATGILLLSFWRIRQKRRRRRKGSSSSGRLTNL 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g04047 1036 PANTHER PEPTIDASE S8 39 454 - -
Trre3g04047 1036 FunFam subtilisin-like protease SBT6.1 172 466 - -
Trre3g04047 1036 Pfam Subtilase family 201 451 IPR000209 GO:0006508|GO:0008236
Trre3g04047 1036 SUPERFAMILY Subtilisin-like 179 463 IPR036852 GO:0004252|GO:0006508
Trre3g04047 1036 CDD Peptidases_S8_SKI-1_like 194 450 IPR034185 -
Trre3g04047 1036 ProSitePatterns Serine proteases, subtilase family, serine active site. 404 414 IPR023828 -
Trre3g04047 1036 ProSitePatterns Serine proteases, subtilase family, histidine active site. 240 250 IPR022398 -
Trre3g04047 1036 ProSiteProfiles Serine proteases, subtilase domain profile. 172 470 - -
Trre3g04047 1036 Gene3D Peptidase S8/S53 domain 173 466 IPR036852 GO:0004252|GO:0006508
Trre3g04047 1036 PRINTS Subtilisin serine protease family (S8) signature 200 219 IPR015500 -
Trre3g04047 1036 PRINTS Subtilisin serine protease family (S8) signature 236 249 IPR015500 -
Trre3g04047 1036 PRINTS Subtilisin serine protease family (S8) signature 403 419 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g04047 Trre-Chr3 51973314 51978985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g04047 274 1014 Subtilisin-like Serine Gene Family AT5G19660 80.108 0.0 1244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g04047 3 51973314 51978985 Trre3g04047 3 51973314 51978985 ECH