Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03985 ATGTCTACAGTGGTGATAAGAGAGGCAGGATCAATGAACGATAGGTTTCAGATTCAAGCGATGTTTGGTGTGTTTGGTGTGTTTGGTGATGGCCCGAAGGAATTGAAAGGCCGTCCTTGGGTTCATATTGTTTACGTTGCGGAAGACATCAAAATCCCTGAAACTGGAATGCTTGGTTACATCCACGCTAAAGTTTTTAAGGAAACTGATACTAATAAGGTAACTAAGCATCACGGTTATATCACTGTCGTCATTGTTCGGCGTTTGTTCCAGAGGAGTGGTCTGGCTACTAAGCTTATCACCGTCGTCGAAAACGATATGAAACAGAAATGGAACACTGACTACATCACAGTGAACGTCCCCAAGACTAAATTAGCAGCAAAGCATTTGTTTGAGCACAATAACTACACTCTTGATCATGAAGATGAGGATGCTTATCACTTTCTCAAGCAACTCAAATGGAATGAAGTTGATTCTTGTTCTGAAAAGACCAAAAGGCGTCGCCATGATTTCTTCTTCTTCTTCTTCTCATGTGACCAAAGGGAAGAATATTAA 555 0.4108 MSTVVIREAGSMNDRFQIQAMFGVFGVFGDGPKELKGRPWVHIVYVAEDIKIPETGMLGYIHAKVFKETDTNKVTKHHGYITVVIVRRLFQRSGLATKLITVVENDMKQKWNTDYITVNVPKTKLAAKHLFEHNNYTLDHEDEDAYHFLKQLKWNEVDSCSEKTKRRRHDFFFFFFSCDQREEY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03985 184 Coils Coil 181 184 - -
Trre3g03985 184 CDD NAT_SF 44 110 - -
Trre3g03985 184 Pfam Acetyltransferase (GNAT) family 55 133 IPR000182 GO:0016747
Trre3g03985 184 PANTHER N-TERMINAL ACETYLTRANSFERASE 39 161 IPR045047 GO:0004596|GO:0006474|GO:0031415
Trre3g03985 184 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 40 146 IPR016181 -
Trre3g03985 184 Gene3D - 37 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03985 Trre-Chr3 51110217 51110771 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre3g03985 Acetyltransf_1 1.1e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03985 K20791 - han:110873070 71.2478