Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03963 ATGTTTGCTCCTTTGAGAAAACAAGAGGTTGGATTGTTGATTAAGTCAATAAGAAAATCTGCTTTATTACATGAAATTGTTGATGTTAGCAAAGTTGTGGCTGAGCTTATTGAGAATATCACATATAAAATAATATTGGGTCGAAGCAAAGATGATAGGTTCGACTTAAAAGATCTTGTTCATAAGGTAATAGAATTGCTTGGAATGTTTAATCTAGCTGATTATCTACCTTGGCTACGCCCATTTGATCTTCAGGGAATAGAAAGACAGTGTAAGAAAACAGGTAAGAAATTTGACGAATTTTTGGAGCACATAATAAAAGAGCACGAGAATCCAACAATTGAAGAACAAAAAGGTCATCACGACAAAGATTTTGTAGACATATTGTTATCACTCATGAACCAACCAATTGATTCCAAAGACAAAAAATATGACATTGATAGAACCAACATCAAGGCTCTTATACTGGACTTGATTTCAGCAGCAATAGACACAACCTCTGTTGCAATTGCATGGGCACTTTCACTACTCCTAAAGCATCCTAATACAATGAAGAGACTTCAACATGAGCTAGAAAATGTTGTTGGAATGAATAGACAAGTAGAAGAGACCCACTTGGAAAATTTACCTTACTTGTCTATGGTTATGAAAGAGACCTTTAGGTTGTTCCCTGTTGCACCTTTCTTACCACCTCATGCGTGTGCTCAAGATGTTGTTGTGGATGGCTATCACATAAAGAAAAATACAACAATTTTAATAAATATATGGACAATTGGAAGAGATACTAAGATTTGGTCAGATAATGCTGAGATGTTTTATCCAGAGAGATTTGAAGAGAATAATGTAGACGTTCGCGGACAAGATTAA 867 0.3506 MFAPLRKQEVGLLIKSIRKSALLHEIVDVSKVVAELIENITYKIILGRSKDDRFDLKDLVHKVIELLGMFNLADYLPWLRPFDLQGIERQCKKTGKKFDEFLEHIIKEHENPTIEEQKGHHDKDFVDILLSLMNQPIDSKDKKYDIDRTNIKALILDLISAAIDTTSVAIAWALSLLLKHPNTMKRLQHELENVVGMNRQVEETHLENLPYLSMVMKETFRLFPVAPFLPPHACAQDVVVDGYHIKKNTTILINIWTIGRDTKIWSDNAEMFYPERFEENNVDVRGQD 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03963 288 Pfam Cytochrome P450 2 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 SUPERFAMILY Cytochrome P450 2 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 Coils Coil 184 204 - -
Trre3g03963 288 PANTHER CYTOCHROME P450 93A3-LIKE 2 288 - -
Trre3g03963 288 PRINTS E-class P450 group I signature 213 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 PRINTS E-class P450 group I signature 254 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 PRINTS E-class P450 group I signature 170 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 PRINTS E-class P450 group I signature 150 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 PRINTS P450 superfamily signature 161 178 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 PRINTS P450 superfamily signature 214 225 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03963 288 Gene3D Cytochrome P450 1 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03963 Trre-Chr3 50809095 50815676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03963 2 288 Cytochrome P450 AT3G48310 36.806 8.67e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03963 - - aprc:113867069 360.147