Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03962 ATGAGGAAATTGTGTCACATTCAATTATTGCATGCTTCAAAAGTTGAAATGTTTGCTCCTTTGAGAAAACAAGAGGTTGGATTGTTGATTAAGTCAATAAGAAAATCTGCTTTATTACATGAAATTGTTGATGTTAGCAAAGTTGTGGCTGAGCTTATTGAGAATATCACATATAAAATAATATTGGGTCGAAGCAAAGATGATAGGTTCGACTTAAAAGATCTTGTTCATAAGGTAATAGAATTGCTTGGAATGTTTAATCTAGCTGATTATCTACCTTGGCTACGCCCATTTGATCTTCAGGGAATAGAAAGACAGTGTAAGAAAACAGGTAAGAAATTTGACGAATTTTTGGAGCACATAATAAAAGAGCACGAGAATCCAACAATTGAAGAACAAAAAGGTCATCACGACAAAGATTTTGTAGACATATTGTTATCACTCATGAACCAACCAATTGATTCCAAAGACAAAAAATATGACATTGATAGAACCAACATCAAGGCTCTTATACTGGACTTGATTTCAGCAGCAATAGACACAACCTCTGTTGCAATTGCATGGGCACTTTCACTACTCCTAAAGCATCCTAATACAATGAAGAGACTTCAACATGAGCTAGAAAATGTTGTTGGAATGAATAGACAAGTAGAAGAGACCCACTTGGAAAATTTACCTTACTTGTCTATGGTTATGAAAGAGACCTTTAGGTTGTTCCCTGTTGCACCTTTCTTACCACCTCATGCGTGTGCTCAAGATGTTGTTGTGGATGGCTATCACATAAAGAAAAATACAACAATTTTAATAAATATATGGACAATTGGAAGAGATACTAAGATTTGGTCAGATAATGCTGAGATGTTTTATCCAGAGAGATTTGAAGAGAATAATGTAGACGTTCGCGGACAAGATTAA 915 0.3486 MRKLCHIQLLHASKVEMFAPLRKQEVGLLIKSIRKSALLHEIVDVSKVVAELIENITYKIILGRSKDDRFDLKDLVHKVIELLGMFNLADYLPWLRPFDLQGIERQCKKTGKKFDEFLEHIIKEHENPTIEEQKGHHDKDFVDILLSLMNQPIDSKDKKYDIDRTNIKALILDLISAAIDTTSVAIAWALSLLLKHPNTMKRLQHELENVVGMNRQVEETHLENLPYLSMVMKETFRLFPVAPFLPPHACAQDVVVDGYHIKKNTTILINIWTIGRDTKIWSDNAEMFYPERFEENNVDVRGQD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03962 304 Pfam Cytochrome P450 2 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 Coils Coil 200 220 - -
Trre3g03962 304 Gene3D Cytochrome P450 1 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PANTHER CYTOCHROME P450 93A3-LIKE 1 304 - -
Trre3g03962 304 SUPERFAMILY Cytochrome P450 1 299 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PRINTS P450 superfamily signature 230 241 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PRINTS P450 superfamily signature 177 194 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PRINTS E-class P450 group I signature 166 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PRINTS E-class P450 group I signature 270 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03962 304 PRINTS E-class P450 group I signature 186 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03962 Trre-Chr3 50809047 50815676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03962 1 304 Cytochrome P450 AT3G48310 36.393 7.06e-68 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03962 - - aprc:113867069 384.03