Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03961 ATGTTACCTCAAACACTAGTTATCCCTCAATTTCTCTTTCTAATTACATTCATACTCACTCTATTGGTTACTATATTTGTTCAATCAAAATTGTATAAAAAAAATGGTGGGAAATATCCACCGGGTCCAAAACCATTGCCAATTATTGGCAACCTTCACATGCTAGGGAAACTTCCACATCGTTCCCTTCAATCCCTTGCTAAAAAATATGGACCCATAATGTCCTTTAAATTAGGACAGGTACAAGCCATTGTAATTTCATCACCTCAAATTGCTGAATTATTTCTCAAGACTCATGATATTATTTTCTCTAATAGGCCCCAAACTTTTGCTATGCATTATTTATCATAA 351 0.339 MLPQTLVIPQFLFLITFILTLLVTIFVQSKLYKKNGGKYPPGPKPLPIIGNLHMLGKLPHRSLQSLAKKYGPIMSFKLGQVQAIVISSPQIAELFLKTHDIIFSNRPQTFAMHYLS 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03961 116 Gene3D Cytochrome P450 23 115 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03961 116 Pfam Cytochrome P450 40 114 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g03961 116 PANTHER CYTOCHROME P450 93A3-LIKE 15 116 - -
Trre3g03961 116 SUPERFAMILY Cytochrome P450 37 115 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03961 Trre-Chr3 50808645 50808995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03961 11 116 Cytochrome P450 AT2G45560 44.860 2.53e-26 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03961 - - lja:Lj0g3v0092679.1 129.028