Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03932 ATGAATAATACACCATTTAACAACCATACTACTGAGCCTAGGGATGTTGCTAGTTCGAGTTCTAATTCCACCGGAATTAACCTACCACCGAGGAAGGTCTTACCAGACTCGAAGTTTCAACGTGTTTTACATACCCCACTTATGACAGAACCGCCCGGCACATCAATAAATCAAGTAGGTAATAAGTTTTACGAGGCGTTTCAACAAAAACATGGAAGTTATGCTGATCTTCCTGCTGCCAAAATTACAGAACTAATGAAATCATCTAGTTTGGATCATTTACTGATGCAGAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGTATCTTAGAAGAAAGTGTTGAAAGAAGAAATGGAGAAATACCCCTTCGTGTGGCTTGCTTGTTAAGAAAAGTTGTCCAGGAGATTGAGCGGCGTATATCAACGCAGCAAGAACATTTAAGAACGCAAAACAATCTTTTTAAGACTCGCGAAGAAAAATATAAATCAAGAATATCAGTACTTGAGGCTCTTGCATCAGGAACAAAGGAAGAGAGTAAGCTTGTTCTTACAAGTCAACTTCAACAGTTGAAGAATGAGAATATCATAAAGGAAGAAAAAAATGCACATCATGACTCGAAACCGCCAATTGAGAAGATTGTCAAGGAAGAAACGAAATCAAATGACTCGATAAATGCCGATAAGATTAAAGAGGAGGAAGAAAAGAAAGAAATTGATAAAGAAGTTATTAGATTGATTAAAGAAGTGGAAGATAAAAATTTGGAAAAAGAGGAAATTGATAAAGAAGTTAGTAGATTGATTAAAGAGGTGGATGGCAAAAACATAAAAATTTCGACATTGGAGCAAGACTTAGAAACAATTCAAAAAAGATATGAAGTACAATGCTCAAAGATGGATTCAGAAGCTAAGGATGAAATCGATAAAGAAGTTATTCGATTGAATAAAGAGATCGAGGATAAAAATATGGAAATTTCGACATTGAAGCAAGACTTAGAAACAATCCAAAAAAGATATGAAGTACAATGCTCAAAGATGGAATCAGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGATTGAATAAAGAAATGGAAGACAAAAATACGGAAATTTCGAAATTGAAGCAAGACTTAGAAACAATTAAAAAAAGTTATGAAGTACAATGCTCAAAGTTGGAATCAGAAGTTAAGGATGCTAAAGGAGAATTGAAACAGAAATCACAAGAATATGAGGATTTATTGGAAAAGTTAAGAAAAAAGCTTCAAGAGAGTGAAACTTTGACTAAGTTAAAATATGAGAAGTGGAATATGAAACAAAACCTAATGCAGAAAGCTATGAATTTTCAATTTGGTTCTATACAGCAATTGAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATGAAAGAGCAAACAATTTACTCAGAGGAATGCAAAAGATTTGGTGTAAATCTTAAACCACTAGTTCATGCAGCTGAGAATTATCATACAATTCTTGCAGAAAATAGAAAATTATTTAATGAACTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTGGACCTGGCCAAAAAGAAAAACAATCTATTGTTGAAAGAATTGGTGAATCAGAGTTGGTTGTATCAAATCCAAGCAAAAAAGAAGCACTCAAAACATTTAAGTTTAATAAGATCTTTGGTCCTACCTCATCTCAAGCTGAGGTATATGAAGACATACAAGCCTTTATAAGATCAGTACTTGATGGTTATAATGTTTGTATATTTGCTTATGGTCAAACAGGTTCAGGAAAAACTTATACAATGAGTGGTCCAAACAATGCAACCGGTGAGAGTGTTGGTGTTAACTATAGAGCTCTAAATGACCTCTTCAACATATCAGCAATACCTGATGCTAGTATGCACCCTGTTAAATCAACTGCTGATGTCATAAAGCTAATGGACATTGGTTTGAAAAATAGAGCAAAGAGTTCTACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTTTCGATACATGTTCGTGGAGCGGATAAGAAATCCGGTTCGACTCTACAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGATAGATCGGTCTGAAGTAACCGGTGATAGATTAAAGGAAGCACAACATATTAACAAATCATTGTCTGCTCTTGGAGATGTCATTTTTGCCCTTGCTCAAAAGAGTTCTCATATACCATATAGAAACAGCAAGCTCACACAAATTCTGCAAACCGCTCTCGGTGGTCATGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCCGAATCTTTGAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGTTGCAAAAAGTTCAAAAGATGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTCAAAGATACGATTTCGACAAAAGATGAAGAAATTGAGCGACTACAATTACTTAAGGATCTAAAAAATGTTAATTCTGATAAGCTTGAAGATTAA 2550 0.3459 MNNTPFNNHTTEPRDVASSSSNSTGINLPPRKVLPDSKFQRVLHTPLMTEPPGTSINQVGNKFYEAFQQKHGSYADLPAAKITELMKSSSLDHLLMQNAPTQSLLSVVNGILEESVERRNGEIPLRVACLLRKVVQEIERRISTQQEHLRTQNNLFKTREEKYKSRISVLEALASGTKEESKLVLTSQLQQLKNENIIKEEKNAHHDSKPPIEKIVKEETKSNDSINADKIKEEEEKKEIDKEVIRLIKEVEDKNLEKEEIDKEVSRLIKEVDGKNIKISTLEQDLETIQKRYEVQCSKMDSEAKDEIDKEVIRLNKEIEDKNMEISTLKQDLETIQKRYEVQCSKMESEAKNEMDKEVIRLNKEMEDKNTEISKLKQDLETIKKSYEVQCSKLESEVKDAKGELKQKSQEYEDLLEKLRKKLQESETLTKLKYEKWNMKQNLMQKAMNFQFGSIQQLKLSWESIKQDVMKEQTIYSEECKRFGVNLKPLVHAAENYHTILAENRKLFNELQELKGNIRVYCRIRPFGPGQKEKQSIVERIGESELVVSNPSKKEALKTFKFNKIFGPTSSQAEVYEDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATGESVGVNYRALNDLFNISAIPDASMHPVKSTADVIKLMDIGLKNRAKSSTAMNERSSRSHSVVSIHVRGADKKSGSTLQGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSSHIPYRNSKLTQILQTALGGHAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGVAKSSKDGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKNVNSDKLED 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03932 849 Coils Coil 352 432 - -
Trre3g03932 849 PRINTS Kinesin heavy chain signature 665 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 PRINTS Kinesin heavy chain signature 696 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 PRINTS Kinesin heavy chain signature 745 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 PRINTS Kinesin heavy chain signature 589 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 MobiDBLite consensus disorder prediction 1 32 - -
Trre3g03932 849 SMART kinesin_4 515 803 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 Coils Coil 223 292 - -
Trre3g03932 849 FunFam Kinesin-related protein3 633 837 - -
Trre3g03932 849 Coils Coil 305 350 - -
Trre3g03932 849 Gene3D - 260 301 - -
Trre3g03932 849 Gene3D - 307 348 - -
Trre3g03932 849 Gene3D - 353 395 - -
Trre3g03932 849 Pfam Kinesin motor domain 635 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 Pfam Kinesin motor domain 523 632 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 Gene3D Kinesin motor domain 634 837 IPR036961 -
Trre3g03932 849 Gene3D Kinesin motor domain 459 633 IPR036961 -
Trre3g03932 849 ProSiteProfiles Kinesin motor domain profile. 517 795 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03932 849 MobiDBLite consensus disorder prediction 1 28 - -
Trre3g03932 849 Coils Coil 809 836 - -
Trre3g03932 849 PANTHER KINESIN-LIKE PROTEIN KLP-3 37 245 IPR027640 GO:0003777|GO:0007018
Trre3g03932 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 517 833 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03932 Trre-Chr3 50377706 50383628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03932 249 846 Calmodulin-binding Proteins AT5G65930 29.535 7.63e-61 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03932 K10406 - gmx:100779403 1083.94