Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03931 ATGAATAATACACCATTTAACAACCATACTACTGAGCCTAGGGATGTTGCTAGTTCGAGTTCTAATTCCACCGGAATTAACCTACCACCGAGGAAGGTCTTACCAGACTCGAAGTTTCAACGTGTTTTACATACCCCACTTATGACAGAACCGCCCGGCACATCAATAAATCAAGTAGGTAATAAGTTTTACGAGGCGTTTCAACAAAAACATGGAAGTTATGCTGATCTTCCTGCTGCCAAAATTACAGAACTAATGAAATCATCTAGTTTGGATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGTATCTTAGAAGAAAGTGTTGAAAGAAGAAATGGAGAAATACCCCTTCGTGTGGCTTGCTTGTTAAGAAAAGTTGTCCAGGAGATTGAGCGGCGTATATCAACGCAGCAAGAACATTTAAGAACGCAAAACAATCTTTTTAAGACTCGCGAAGAAAAATATAAATCAAGAATATCAGTACTTGAGGCTCTTGCATCAGGAACAAAGGAAGAGAGTAAGGTAACAAAGCTTGTTCTTACAAGTCAACTTCAACAGTTGAAGAATGAGAATATCATAAAGGAAGAAAAAAATGCACATCATGACTCGAAACCGCCAATTGAGAAGATTGTCAAGGAAGAAACGAAATCAAATGACTCGATAAATGCCGATAAGATTAAAGAGGAGGAAGAAAAGAAAGAAATTGATAAAGAAGTTATTAGATTGATTAAAGAAGTGGAAGATAAAAATTTGGAAAAAGAGGAAATTGATAAAGAAGTTAGTAGATTGATTAAAGAGGTGGATGGCAAAAACATAAAAATTTCGACATTGGAGCAAGACTTAGAAACAATTCAAAAAAGATATGAAGTACAATGCTCAAAGATGGATTCAGAAGCTAAGGATGAAATCGATAAAGAAGTTATTCGATTGAATAAAGAGATCGAGGATAAAAATATGGAAATTTCGACATTGAAGCAAGACTTAGAAACAATCCAAAAAAGATATGAAGTACAATGCTCAAAGATGGAATCAGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGATTGAATAAAGAAATGGAAGACAAAAATACGGAAATTTCGAAATTGAAGCAAGACTTAGAAACAATTAAAAAAAGTTATGAAGTACAATGCTCAAAGTTGGAATCAGAAGTTAAGGATGCTAAAGGAGAATTGAAACAGAAATCACAAGAATATGAGGATTTATTGGAAAAGTTAAGAAAAAAGCTTCAAGAGAGTGAAACTTTGACTAAGTTAAAATATGAGAAGTGGAATATGAAACAAAACCTAATGCAGAAAGCTATGAATTTTCAATTTGGTTCTATACAGCAATTGAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATGAAAGAGCAAACAATTTACTCAGAGGAATGCAAAAGATTTGGTGTAAATCTTAAACCACTAGTTCATGCAGCTGAGAATTATCATACAATTCTTGCAGAAAATAGAAAATTATTTAATGAACTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTGGACCTGGCCAAAAAGAAAAACAATCTATTGTTGAAAGAATTGGTGAATCAGAGTTGGTTGTATCAAATCCAAGCAAAAAAGAAGCACTCAAAACATTTAAGTTTAATAAGATCTTTGGTCCTACCTCATCTCAAGCTGAGGTATATGAAGACATACAAGCCTTTATAAGATCAGTACTTGATGGTTATAATGTTTGTATATTTGCTTATGGTCAAACAGGTTCAGGAAAAACTTATACAATGAGTGGTCCAAACAATGCAACCGGTGAGAGTGTTGGTGTTAACTATAGAGCTCTAAATGACCTCTTCAACATATCAGCAAGCAGACAAAGCTCCATAGTTTATGAAATTGGAGTTCAAATTATTGAAATATATAACGAACAAGTGCGAGATTTGTTATCAACTGATACAGCTGTCAAAAAATATCCTTTTTGTTTTTCAGTTGATACATACATACCTGATGCTAGTATGCACCCTGTTAAATCAACTGCTGATGTCATAAAGCTAATGGACATTGGTTTGAAAAATAGAGCAAAGAGTTCTACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTTTCGATACATGTTCGTGGAGCGGATAAGAAATCCGGTTCGACTCTACAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGATAGATCGGTCTGAAGTAACCGGTGATAGATTAAAGGAAGCACAACATATTAACAAATCATTGTCTGCTCTTGGAGATGTCATTTTTGCCCTTGCTCAAAAGAGTTCTCATATACCATATAGAAACAGCAAGCTCACACAAATTCTGCAAACCGCTCTCGGTGGTCATGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCCGAATCTTTGAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGTTGCAAAAAGTTCAAAAGATGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTCAAAGATACGATTTCGACAAAAGATGAAGAAATTGAGCGACTACAATTACTTAAGGATCTAAAAAATGTTAATTCTGATAAGCTTGAAGATTAA 2676 0.3434 MNNTPFNNHTTEPRDVASSSSNSTGINLPPRKVLPDSKFQRVLHTPLMTEPPGTSINQVGNKFYEAFQQKHGSYADLPAAKITELMKSSSLDNAPTQSLLSVVNGILEESVERRNGEIPLRVACLLRKVVQEIERRISTQQEHLRTQNNLFKTREEKYKSRISVLEALASGTKEESKVTKLVLTSQLQQLKNENIIKEEKNAHHDSKPPIEKIVKEETKSNDSINADKIKEEEEKKEIDKEVIRLIKEVEDKNLEKEEIDKEVSRLIKEVDGKNIKISTLEQDLETIQKRYEVQCSKMDSEAKDEIDKEVIRLNKEIEDKNMEISTLKQDLETIQKRYEVQCSKMESEAKNEMDKEVIRLNKEMEDKNTEISKLKQDLETIKKSYEVQCSKLESEVKDAKGELKQKSQEYEDLLEKLRKKLQESETLTKLKYEKWNMKQNLMQKAMNFQFGSIQQLKLSWESIKQDVMKEQTIYSEECKRFGVNLKPLVHAAENYHTILAENRKLFNELQELKGNIRVYCRIRPFGPGQKEKQSIVERIGESELVVSNPSKKEALKTFKFNKIFGPTSSQAEVYEDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATGESVGVNYRALNDLFNISASRQSSIVYEIGVQIIEIYNEQVRDLLSTDTAVKKYPFCFSVDTYIPDASMHPVKSTADVIKLMDIGLKNRAKSSTAMNERSSRSHSVVSIHVRGADKKSGSTLQGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSSHIPYRNSKLTQILQTALGGHAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGVAKSSKDGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKNVNSDKLED 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03931 891 Coils Coil 303 348 - -
Trre3g03931 891 ProSiteProfiles Kinesin motor domain profile. 515 837 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03931 891 Gene3D Kinesin motor domain 457 839 IPR036961 -
Trre3g03931 891 SMART kinesin_4 513 845 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03931 891 MobiDBLite consensus disorder prediction 1 32 - -
Trre3g03931 891 FunFam Kinesin-related protein3 674 879 - -
Trre3g03931 891 Pfam Kinesin motor domain 521 835 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03931 891 PANTHER KINESIN-LIKE PROTEIN KLP-3 361 873 IPR027640 GO:0003777|GO:0007018
Trre3g03931 891 Coils Coil 851 878 - -
Trre3g03931 891 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 457 667 - -
Trre3g03931 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 515 875 IPR027417 -
Trre3g03931 891 Coils Coil 350 430 - -
Trre3g03931 891 Gene3D - 351 393 - -
Trre3g03931 891 Gene3D - 258 299 - -
Trre3g03931 891 Gene3D - 305 346 - -
Trre3g03931 891 MobiDBLite consensus disorder prediction 1 28 - -
Trre3g03931 891 Coils Coil 173 193 - -
Trre3g03931 891 Coils Coil 221 290 - -
Trre3g03931 891 PRINTS Kinesin heavy chain signature 738 756 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03931 891 PRINTS Kinesin heavy chain signature 787 808 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03931 891 PRINTS Kinesin heavy chain signature 707 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03931 891 PRINTS Kinesin heavy chain signature 587 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03931 Trre-Chr3 50377706 50383628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03931 247 888 Calmodulin-binding Proteins AT5G65930 30.240 1.29e-68 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03931 K10406 - gmx:100779403 1144.41