Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03929 ATGAATAATACACCATTTAACAACCATACTACTGAGCCTAGGGATGTTGCTAGTTCGAGTTCTAATTCCACCGGAATTAACCTACCACCGAGGAAGGTCTTACCAGACTCGAAGTTTCAACGTGTTTTACATACCCCACTTATGACAGAACCGCCCGGCACATCAATAAATCAAGTAGGTAATAAGTTTTACGAGGCGTTTCAACAAAAACATGGAAGTTATGCTGATCTTCCTGCTGCCAAAATTACAGAACTAATGAAATCATCTAGTTTGGATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGTATCTTAGAAGAAAGTGTTGAAAGAAGAAATGGAGAAATACCCCTTCGTGTGGCTTGCTTGTTAAGAAAAGTTGTCCAGGAGATTGAGCGGCGTATATCAACGCAGCAAGAACATTTAAGAACGCAAAACAATCTTTTTAAGACTCGCGAAGAAAAATATAAATCAAGAATATCAGTACTTGAGGCTCTTGCATCAGGAACAAAGGAAGAGAGTAAGCTTGTTCTTACAAGTCAACTTCAACAGTTGAAGAATGAGAATATCATAAAGGAAGAAAAAAATGCACATCATGACTCGAAACCGCCAATTGAGAAGATTGTCAAGGAAGAAACGAAATCAAATGACTCGATAAATGCCGATAAGATTAAAGAGGAGGAAGAAAAGAAAGAAATTGATAAAGAAGTTATTAGATTGATTAAAGAAGTGGAAGATAAAAATTTGGAAAAAGAGGAAATTGATAAAGAAGTTAGTAGATTGATTAAAGAGGTGGATGGCAAAAACATAAAAATTTCGACATTGGAGCAAGACTTAGAAACAATTCAAAAAAGATATGAAGTACAATGCTCAAAGATGGATTCAGAAGCTAAGGATGAAATCGATAAAGAAGTTATTCGATTGAATAAAGAGATCGAGGATAAAAATATGGAAATTTCGACATTGAAGCAAGACTTAGAAACAATCCAAAAAAGATATGAAGTACAATGCTCAAAGATGGAATCAGAAGCTAAGAATGAAATGGATAAAGAAGTTATTAGATTGAATAAAGAAATGGAAGACAAAAATACGGAAATTTCGAAATTGAAGCAAGACTTAGAAACAATTAAAAAAAGTTATGAAGTACAATGCTCAAAGTTGGAATCAGAAGTTAAGGATGCTAAAGGAGAATTGAAACAGAAATCACAAGAATATGAGGATTTATTGGAAAAGTTAAGAAAAAAGCTTCAAGAGAGTGAAACTTTGACTAAGTTAAAATATGAGAAGTGGAATATGAAACAAAACCTAATGCAGAAAGCTATGAATTTTCAATTTGGTTCTATACAGCAATTGAAATTGTCTTGGGAATCCATTAAGCAAGATGTTATGAAAGAGCAAACAATTTACTCAGAGGAATGCAAAAGATTTGGTGTAAATCTTAAACCACTAGTTCATGCAGCTGAGAATTATCATACAATTCTTGCAGAAAATAGAAAATTATTTAATGAACTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCATTTGGACCTGGCCAAAAAGAAAAACAATCTATTGTTGAAAGAATTGGTGAATCAGAGTTGGTTGTATCAAATCCAAGCAAAAAAGAAGCACTCAAAACATTTAAGTTTAATAAGATCTTTGGTCCTACCTCATCTCAAGCTGAGGTATATGAAGACATACAAGCCTTTATAAGATCAGTACTTGATGGTTATAATGTTTGTATATTTGCTTATGGTCAAACAGGTTCAGGAAAAACTTATACAATGAGTGGTCCAAACAATGCAACCGGTGAGAGTGTTGGTGTTAACTATAGAGCTCTAAATGACCTCTTCAACATATCAGCAATACCTGATGCTAGTATGCACCCTGTTAAATCAACTGCTGATGTCATAAAGCTAATGGACATTGGTTTGAAAAATAGAGCAAAGAGTTCTACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTTTCGATACATGTTCGTGGAGCGGATAAGAAATCCGGTTCGACTCTACAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGATAGATCGGTCTGAAGTAACCGGTGATAGATTAAAGGAAGCACAACATATTAACAAATCATTGTCTGCTCTTGGAGATGTCATTTTTGCCCTTGCTCAAAAGAGTTCTCATATACCATATAGAAACAGCAAGCTCACACAAATTCTGCAAACCGCTCTCGGTGGTCATGCAAAGACACTCATGTTAGTCCAAATTACTTCAGACATAAAGTCTTATTCCGAATCTTTGAGTACTTTGAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGAGTTGCAAAAAGTTCAAAAGATGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTCAAAGATACGATTTCGACAAAAGATGAAGAAATTGAGCGACTACAATTACTTAAGGATCTAAAAAATGTTAATTCTGATAAGCTTGAAGATTAA 2535 0.3456 MNNTPFNNHTTEPRDVASSSSNSTGINLPPRKVLPDSKFQRVLHTPLMTEPPGTSINQVGNKFYEAFQQKHGSYADLPAAKITELMKSSSLDNAPTQSLLSVVNGILEESVERRNGEIPLRVACLLRKVVQEIERRISTQQEHLRTQNNLFKTREEKYKSRISVLEALASGTKEESKLVLTSQLQQLKNENIIKEEKNAHHDSKPPIEKIVKEETKSNDSINADKIKEEEEKKEIDKEVIRLIKEVEDKNLEKEEIDKEVSRLIKEVDGKNIKISTLEQDLETIQKRYEVQCSKMDSEAKDEIDKEVIRLNKEIEDKNMEISTLKQDLETIQKRYEVQCSKMESEAKNEMDKEVIRLNKEMEDKNTEISKLKQDLETIKKSYEVQCSKLESEVKDAKGELKQKSQEYEDLLEKLRKKLQESETLTKLKYEKWNMKQNLMQKAMNFQFGSIQQLKLSWESIKQDVMKEQTIYSEECKRFGVNLKPLVHAAENYHTILAENRKLFNELQELKGNIRVYCRIRPFGPGQKEKQSIVERIGESELVVSNPSKKEALKTFKFNKIFGPTSSQAEVYEDIQAFIRSVLDGYNVCIFAYGQTGSGKTYTMSGPNNATGESVGVNYRALNDLFNISAIPDASMHPVKSTADVIKLMDIGLKNRAKSSTAMNERSSRSHSVVSIHVRGADKKSGSTLQGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKSSHIPYRNSKLTQILQTALGGHAKTLMLVQITSDIKSYSESLSTLKFAERVSGVELGVAKSSKDGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKNVNSDKLED 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03929 844 Coils Coil 218 287 - -
Trre3g03929 844 Coils Coil 804 831 - -
Trre3g03929 844 Coils Coil 347 427 - -
Trre3g03929 844 Coils Coil 300 345 - -
Trre3g03929 844 Gene3D Kinesin motor domain 454 628 IPR036961 -
Trre3g03929 844 SMART kinesin_4 510 798 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03929 844 Gene3D Kinesin motor domain 629 832 IPR036961 -
Trre3g03929 844 Gene3D - 255 296 - -
Trre3g03929 844 Gene3D - 302 343 - -
Trre3g03929 844 Gene3D - 348 390 - -
Trre3g03929 844 MobiDBLite consensus disorder prediction 1 33 - -
Trre3g03929 844 ProSiteProfiles Kinesin motor domain profile. 512 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03929 844 FunFam Kinesin-related protein3 628 832 - -
Trre3g03929 844 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 512 828 IPR027417 -
Trre3g03929 844 MobiDBLite consensus disorder prediction 1 28 - -
Trre3g03929 844 PANTHER KINESIN-LIKE PROTEIN KLP-3 37 240 IPR027640 GO:0003777|GO:0007018
Trre3g03929 844 PRINTS Kinesin heavy chain signature 740 761 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03929 844 PRINTS Kinesin heavy chain signature 584 605 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03929 844 PRINTS Kinesin heavy chain signature 691 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03929 844 PRINTS Kinesin heavy chain signature 660 677 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03929 844 Pfam Kinesin motor domain 518 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g03929 844 Pfam Kinesin motor domain 630 788 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03929 Trre-Chr3 50377706 50383628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03929 244 841 Calmodulin-binding Proteins AT5G65930 29.535 7.36e-61 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03929 K10406 - gmx:100779403 1090.1