Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03862 ATGGCAGCACAGTTTGTTGTTGGTAAGTCATTTCTTTCATCTGTGTTTCAAGTGATTTTTGAGAGGTTAGCTTCAAGAGATGTCAGAAACTACTTGGATGAAGAAGTGGTGAAAAAGCTTGAAATCACACTGAGTTCTATCAATGATGTGCTGGATGATGCAGAAAAAAAGCAGTACAAAGACCTAAAAGTGAAGAATTGGCTTGATGATCTCCAACATGAGGTATACGAATTAGACCAACTATTGGATCTGATTGATACTAATGCGCAACGAAAGGGCACAATACGACGCTTTGTTTCAGGTTTTATCAAACGATTTGAATATATGATCATGATTAAAGTATTGCTACATAGGCTAGAGTTCCTTAGACAACAATATATATGGAAGAGTCTATCAACTACATCTTCCGCGGTGGATGACAACTACATTAACCTTCCTTCCAGATTACTGAGATCGAGTTACCTTAACCTTCCTTCCAATGTGAAACGTTGTTTTGCTTATTGTTCTATATTTCCCAAGGGCTATGAGATTGACAAGGGTCAATTAATCAAGCTTTGGATGGCAGAAGGTTTGTTGAAGTGTTGCGGAGACAAAAGTGAAGAAGAGTTGGGTAATGAGTTCTTCAACGATCTAGTGTCAAAATCGTTTTTCCAACCATCAGTAATTATGCCATTATGGAATTGTAACTACTACATCACCTTGCATGATATTGCCAATGATTTAGCTAAATCAGTGTCAGGAGAATCCCGCTTACGAATAGAGGGCGATAACGTGCAACATATCCCTGAAAGGACACGTCACATTTGGTCCTGCCTTGATTTGAAAGATGGTGATAGAAAACTAGAGCATATTTGTAAAATTAAGGGACTACACGGTTTGATTGTAGAAGCACAGAGCTATGGTGACCAACGCTTTAAGATAAGCACCAATGTGCAGCAAAAATTGTTTTCAAGTCTAAAATATCTGCGAATGTTGTCTTTCTCTGGTTGCAATCTCCTAGAGCTAGCTGATGAGATAACGAATTTGAAGCTTCTGCGCTATCTAGACCTTTCTTACACTGAAATTGCAAGCTTACCTAATTCCATTTGTATGCTGTATAATTTGCAGACACTCTTATTGCAAGATTGTTTTAAACTGACTGAGCTCCCTTCAGATTTTAGCAAGCTCATTAATTTACGTCATCTTAATTTGGAAGGAACTCATATAATGAAGATGCCAACGATGATAGGAGGGTTAAACAATCTTCAGATGCTGACTGATTTTGTTGTGGGAGAGCAGCATGGATTTGATATTAAGAAGTTGGGGAAACTCAACCAACTACAAGGAAAGCTTCGAATTTCAGGGTTGGAAAATGTCATTGATCCTGCACATGCCGCAACAGCAAGTTTGAAAGGTAAGAAACATTTAGAAGAATTAAGTATGTCATACGGTGAATTGAGAGAAATGAATGGCTCATTAATTGAATTACATTTCCTTGTCTTGGATGCTCTTCAACCTAATAGAAACCTCAAGAGGCTCACCATCAAAGATTATAGAAATAGTAGGTTTCCAATATGGCTTGACGATCATCATTTACCCAAGTTAGTATCTCTTGAATTATTGGGATGTAAACTTCGTTCCAAGTTGCCACCACTTGGGCAGTTCCCCTCACTCAAGAAGCTTTCCATTTCCGGCTGTGATGGAATAGAGACCATTGGTACAGCGTTTTACGGCTATAATTCTTCAAATGTTCCATTTAGATCGCTTGAAATTTTGCGATTTGAGCACATGTCTGAATGGAAGGAATGGTTATGTATTGAACTAATTGAATGTTTCCCTTTGCTTCAAGAGCTTTGTTTAAAACGTTGTCCCAAGTTGAAAAGTGCCCTGCCTCAATGCCTTCCCTCTTTGCGAAAAATGGAGATTATTGATTGCGAAGAGTTAGAAGCTTCAGTTCCTAAGGCTGTTTATATCAGTGAGCTAGAACTAAAGAGATGTGATGACATTTTGATAAATGAATTGCCATCCCTCTTGAAAAGGGTCACCCTTTGTGGAACCCGGGTCATTGAATCCACTCTAGAGAAAATTCTATTTAATAATGCCTTTCTTGAAGAGTTGGAAGTTGAAGACTTCTTTGGTCCAAATCTAGAATTGTCCTCTTTGGATTTCAATAGCTTTATTTTTCTTCGCACTCTAACTATAATAGGTTGGCACTCTTCATCCTTGCCTTTTGCTCGACACTTGTTCCCCAATCTTAATTCTCTCGCGTTGTACGATAGTCCATGGCTGGAATCATTTTTCGGGAGGCAATTACCTTCCAATCTATGCAGTCTCAAAATAGAAAGATGCCCCAAATTGATGGCTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCAATTCTCTGAAACAATTCAGGGTTAGTGATGATTTTGAAATCTTTGAGTCCTTTCCAGAGGAGAATCTGCTGCCATCAACTATTAACTCTCTTGAGTTGACAAATTGTTCCAACCTAAGAATAATAAATTACAAGGGTCTTCTCCACCTCACTTCACTTGAGTCTCTATACATTGAAGACTCTCCTTGTCTTAAGAGCTTGCCAGAGGAGGGTCTACCTAGCTCCCTTTCTACTTTGTCCATTCATGATTGTCCATTAATTACGCAGCAGTACCAAAAGGAGCAAGGGGAGCGTTGGCATACAATTAGTCACATTCCTGATGTGACAATTTCCTGA 2709 0.3891 MAAQFVVGKSFLSSVFQVIFERLASRDVRNYLDEEVVKKLEITLSSINDVLDDAEKKQYKDLKVKNWLDDLQHEVYELDQLLDLIDTNAQRKGTIRRFVSGFIKRFEYMIMIKVLLHRLEFLRQQYIWKSLSTTSSAVDDNYINLPSRLLRSSYLNLPSNVKRCFAYCSIFPKGYEIDKGQLIKLWMAEGLLKCCGDKSEEELGNEFFNDLVSKSFFQPSVIMPLWNCNYYITLHDIANDLAKSVSGESRLRIEGDNVQHIPERTRHIWSCLDLKDGDRKLEHICKIKGLHGLIVEAQSYGDQRFKISTNVQQKLFSSLKYLRMLSFSGCNLLELADEITNLKLLRYLDLSYTEIASLPNSICMLYNLQTLLLQDCFKLTELPSDFSKLINLRHLNLEGTHIMKMPTMIGGLNNLQMLTDFVVGEQHGFDIKKLGKLNQLQGKLRISGLENVIDPAHAATASLKGKKHLEELSMSYGELREMNGSLIELHFLVLDALQPNRNLKRLTIKDYRNSRFPIWLDDHHLPKLVSLELLGCKLRSKLPPLGQFPSLKKLSISGCDGIETIGTAFYGYNSSNVPFRSLEILRFEHMSEWKEWLCIELIECFPLLQELCLKRCPKLKSALPQCLPSLRKMEIIDCEELEASVPKAVYISELELKRCDDILINELPSLLKRVTLCGTRVIESTLEKILFNNAFLEELEVEDFFGPNLELSSLDFNSFIFLRTLTIIGWHSSSLPFARHLFPNLNSLALYDSPWLESFFGRQLPSNLCSLKIERCPKLMASREEWGLFQLNSLKQFRVSDDFEIFESFPEENLLPSTINSLELTNCSNLRIINYKGLLHLTSLESLYIEDSPCLKSLPEEGLPSSLSTLSIHDCPLITQQYQKEQGERWHTISHIPDVTIS 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03862 902 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 690 877 - -
Trre3g03862 902 Gene3D Ribonuclease Inhibitor 706 885 IPR032675 -
Trre3g03862 902 Pfam Rx N-terminal domain 11 93 IPR041118 -
Trre3g03862 902 Gene3D - 150 245 IPR036388 -
Trre3g03862 902 Coils Coil 37 57 - -
Trre3g03862 902 SUPERFAMILY L domain-like 661 880 - -
Trre3g03862 902 SUPERFAMILY L domain-like 235 642 - -
Trre3g03862 902 Gene3D - 25 114 - -
Trre3g03862 902 FunFam Probable disease resistance protein At1g63360 154 244 - -
Trre3g03862 902 Gene3D Ribonuclease Inhibitor 302 660 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03862 Trre-Chr3 49715225 49717933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03862 322 418 WRKY Transcription Factor Family AT4G12020 34.694 6.24e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03862 - - mtr:11411709 1115.52