Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre3g03857 | ATGAAGAACCAAATGACATTTCTTGAAGCCACTTTCCATTACAATAAACCTCAACTCAACATTATCACCATTATCTTGTTCTTGATCACAATTGTTCAATCTATTAATCCAAAATTTGAGGCATGCACACCTCAAACCTGTGGAAATGGTCCCTCCATAAAGTATCCTTTTTGGATCCCATATCAACAAGATTCATTTTGTGGTTATCCACAATTTGAGATCACATGCAAAAACAACAATCCAATTCTCAAAACTTCAACTTATGATCTTTTAGTAAAAAACATCTCTTACTCAAACTCTTCATTACTTGCAACCAACATAGATGTCTATGACAAAAACTGTCCTGCTCCTATGTATAATTACACCCTTGCCCTTGATCAAACTCCATTTACATATAGTTCTGAAAATTCCAATCTTTCTTTCTTCTACAACTGTACAACAGAACCTATAGATTATCCTACTTATGATGTAGAATGTGCAGAAAATGCTACACATTATTCTTTTGCTGTTTTTCATAAGGAAGCATTAGAGCACAAAAACTATTCGTTGAATGAGTGTGAGTTTATGGTTAATACACCATTGGTTTTGAATACTAGTGTTAATTTCACTAGCTTGTTGAGAATGAGTTACATCGATGTTTTGAAGATGGGATTTGTTTTGAATTGGACTGTACCTGATTGTCAACATTGTGAGAAAAGTGGTGGAAGATGTGGATTTGATAATTATAAGTTCATATGTTTCTGCAAGGATAAGTCCTACCTAAAAATTTGTGGTGACGATGATGCTCTTGCTGCTTCTATTTTCGGAGCACTTGCAATGATAACTGCGATATATTTTTGTAAGCGCCGGAAGAATATAAGTTATGCAAAGTCATATGTACAGTCTCACAGCCTCTCTACCGATCCATCGTCAAAGGATCTTGAGAGATCAGGAAGTCAATACTTTGGAGGAAGTCAAAACTTTGGAGTGCAACATTTCACTTATAGCGAGCTTGAAGAAGCCACAAACTTCTTCGATCCAACCAAAGAACTAGGAGAAGGGGGCTTTGGGACAGTGTACTTTGGAAAACTGTATGATGGGCGTAGTGTTGCAGTGAAGAGGTTATACGAGAACAATTACAAAAGAGTCGAGCAATTCATGAATGAAGTTAAACTCTTAGCAGGATTAGTCCATCCAAATCTCGTGTCTCTATATGGATGCACTTCACGCCACAGTCGGGAACTTCTACTTGTCTACGAGTATGTGTCCAATGGAACTGTTGCTGATCATCTCCATGGTAAACAAACAAAACATGGAAAGCTTTCTTGGCCGATTAGAATGAATATTGCCGTGGAGACAGCAAGTGCGTTGAAGTATCTTCATATTTCTGACATCATTCACCGAGATATTAAAACCAATAATATTCTTCTTGACGCTCACTTCCGCGTCAAAGTAGCAGATTTTGGACTCTCACGTCTTTTTCCATATGATCAAACTCATGTTTCAACGGCTCCACAAGGGACTCCAGGTTATGTCGATCCTGATTACCATCAATGCTATCAACTTACCGACAAAAGTGATGTCTATAGCTTTGGAGTTGTGTTGATCGAGTTGATATCGTCTTTACCTGCCGTTGATATAACAAGGCATAGACATGAAATCAATTTATCCAACATGGCTATTAACAGAATTCAAAATCAAGCATTGCATGAAATTGTCGATCCTACCCTCGGTTATGAATCAGATCCAAAGGTAAAGAAAATGATAAATGCTATTGGTGAATTAGCATTTCAATGTTTACAAAGTTCCAAAGATTTAAGACCTTGCATGGATGATGTGTTAGAAACTTTATTGGATATTCAAAGTGATGGTAAACATAAAAGTAAACCTGAGGTATTGGACATTTCAAGTTTAGCTGATGATGTTGTTTTGTTGAATCATGATCCACCTCCATTATCACCTGATTCAAATCTTGGTAGCAATTATACAACACCAAATACTAGTGGTTAA | 1989 | 0.3675 | MKNQMTFLEATFHYNKPQLNIITIILFLITIVQSINPKFEACTPQTCGNGPSIKYPFWIPYQQDSFCGYPQFEITCKNNNPILKTSTYDLLVKNISYSNSSLLATNIDVYDKNCPAPMYNYTLALDQTPFTYSSENSNLSFFYNCTTEPIDYPTYDVECAENATHYSFAVFHKEALEHKNYSLNECEFMVNTPLVLNTSVNFTSLLRMSYIDVLKMGFVLNWTVPDCQHCEKSGGRCGFDNYKFICFCKDKSYLKICGDDDALAASIFGALAMITAIYFCKRRKNISYAKSYVQSHSLSTDPSSKDLERSGSQYFGGSQNFGVQHFTYSELEEATNFFDPTKELGEGGFGTVYFGKLYDGRSVAVKRLYENNYKRVEQFMNEVKLLAGLVHPNLVSLYGCTSRHSRELLLVYEYVSNGTVADHLHGKQTKHGKLSWPIRMNIAVETASALKYLHISDIIHRDIKTNNILLDAHFRVKVADFGLSRLFPYDQTHVSTAPQGTPGYVDPDYHQCYQLTDKSDVYSFGVVLIELISSLPAVDITRHRHEINLSNMAINRIQNQALHEIVDPTLGYESDPKVKKMINAIGELAFQCLQSSKDLRPCMDDVLETLLDIQSDGKHKSKPEVLDISSLADDVVLLNHDPPPLSPDSNLGSNYTTPNTSG | 662 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre3g03857 | 662 | Pfam | Protein kinase domain | 341 | 608 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre3g03857 | 662 | FunFam | Wall-associated receptor kinase-like 20 | 415 | 623 | - | - | |
Trre3g03857 | 662 | Pfam | Wall-associated receptor kinase galacturonan-binding | 42 | 102 | IPR025287 | GO:0030247 | |
Trre3g03857 | 662 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 23 | 657 | IPR044652 | GO:0004672 | |
Trre3g03857 | 662 | MobiDBLite | consensus disorder prediction | 646 | 662 | - | - | |
Trre3g03857 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 316 | 414 | - | - | |
Trre3g03857 | 662 | ProSiteProfiles | Protein kinase domain profile. | 338 | 611 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre3g03857 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 415 | 625 | - | - | |
Trre3g03857 | 662 | SMART | serkin_6 | 338 | 611 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre3g03857 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 320 | 616 | IPR011009 | - | |
Trre3g03857 | 662 | Pfam | Wall-associated receptor kinase C-terminal | 165 | 251 | IPR032872 | - | |
Trre3g03857 | 662 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 458 | 470 | IPR008271 | GO:0004672|GO:0006468 | |
Trre3g03857 | 662 | ProSitePatterns | Protein kinases ATP-binding region signature. | 344 | 366 | IPR017441 | GO:0005524 | |
Trre3g03857 | 662 | MobiDBLite | consensus disorder prediction | 640 | 662 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre3g03857 | Trre-Chr3 | 49669835 | 49672745 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre3g03857 | 218 | 662 | Receptor kinase-like Gene Family | AT1G25390 | 50.533 | 8.62e-142 | 426 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Trre3g03857 | Pkinase | 3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre3g03857 | - | - | qsu:112024175 | 767.303 |