Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03846 ATGAAAATCATTCTAGGTGTTGGAAGTGCAGCAATGATTTCAGATTTCGGATTTGCAAAGCTCAACCTGAAGAAAGAGAGCATTATTTCGATATCAGGTCAAAGAGGGACAATGGGCTATGTAGCACCAGAAATGTGGAATAGACATTTTGGAGGAGTTTCGCACAAGTCCGATGTTTATAGTTATGGAGTTATGTTGTTAGAAATGGTGGGTGGAAGGAAAAACATTAATGCTGATGCAAGTCACACAAGTGAGATATATTTTCCTCATTGGGTATACAATAGGCTTGTGGTTGGTAGTGATTTGAGAACTGATGGGATAATGGATACTGAAAAAGATGATCTTGCAAGGAGAATGACCATTGTGGGTTTATGGTGTATTCAAACATTTCCTAACAATAGGCCTACAATGAGCAAAGTGATTGAAATGTTAGAAGTTAACATGAATTTGTTGGAAATACCACCAAAACCATTGCTTTCATCTCCTACTAGATCGGAATCAGAGTATTGCACATCTTAA 519 0.3757 MKIILGVGSAAMISDFGFAKLNLKKESIISISGQRGTMGYVAPEMWNRHFGGVSHKSDVYSYGVMLLEMVGGRKNINADASHTSEIYFPHWVYNRLVVGSDLRTDGIMDTEKDDLARRMTIVGLWCIQTFPNNRPTMSKVIEMLEVNMNLLEIPPKPLLSSPTRSESEYCTS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03846 172 SUPERFAMILY Protein kinase-like (PK-like) 5 165 IPR011009 -
Trre3g03846 172 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g03846 172 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 164 IPR045874 GO:0004672
Trre3g03846 172 Pfam Protein tyrosine and serine/threonine kinase 5 144 IPR001245 GO:0004672|GO:0006468
Trre3g03846 172 Gene3D Transferase(Phosphotransferase) domain 1 2 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03846 Trre-Chr3 49619153 49620570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03846 3 159 Receptor kinase-like Gene Family AT1G66980 51.235 2.39e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre3g03846 PK_Tyr_Ser-Thr 2.4e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03846 - - psat:127114885 279.256