Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre3g03836 | ATGGAGATTTTCAAATTCTTCTTCTACTTCATTAATCTTCTCTTTGCTTTCATCTTAACATCATCATCTTTAGCAATTGATCCTTACTCAAAAGCACTCCTAAGTCTAAAATCTGAGCTTATAGATTATGATAATACCTTACATGACTGGATGGTGACATCAAATGGAAATTCCTATGCATGTTCTTGGTCTGGCATAAAGTGTAACAAGGACTCAATTGTAATTTCAATAGACCTTTCCATGAAGAAACTTGGAGGTATACTATCAGGTAACCAATTAAGTATCTTCACAAATGTTACTGATTTCAACATAAGCTATAATTTCTTCTCTGGTAAACTTCCACAAGAAATTTTCAACCTCACTAGCTTAAAAAGCTTGGATATAAGCAGAAACAATTTCTCAGGTCAATTTCCAAAAGGAATTCCTAAACTCAAAAACTTGGTTGTACTTGATGCTTTTAGTAACAGCTTTTCAGGTGAATTACCATATGAATTTTCAGAATTGGATAATCTTAAGATTCTTAATCTAGCTGGTAGTTACTTCAGTGGAACAATTCCATCTGAATATGGTTCTTTCAGAAAACTTGAGTTTCTTCATTTAGCTGGAAATTCTCTATCTGGAAGTATACCTTCAGAACTTGGTAACCTCGAAACAGCGACACATATCGAGATCGGTTATAACTTTTATCAGGGTCTCATTCCACCTCAGCTAGGTAATTTGAGCCAGCTTCATTATCTTGATATAGCTGGTGCAAATCTATCTGGATCAATTCCAAAGGAATTTTCAAACCTCACAAGTTTACAATCACTTTTTCTTTTCAGAAACCAACTCACAGGTTCAATACCAAGTGAGTTGAGCAATATTAAACCTCTCACAAATTTAGATCTTTCTGATAATTTCCTTTCAGGGTCAATTCCCGAAAGCTTTTCCGAGCTGAAAAGTTTAAGACTTCTTAGTCTTATGTATAATGACATGAGTGGAACTGTTCCTGATGGAATTGCAGAACTAAGTTCATTGGAAACTCTACTCATTTGGAATAATCACTTCTCTGGATTACTTCCGAAGAGTTTAGGTAAAAACTCGAAACTCAAGTGGGTGGATGTTTCCACAAACAAATTCAATGGCAGTATACCACAAGACATTTGTCGAGGTGGAGTACTGTCGAAGCTAATCCTGTTTTCGAACAAATTCACAGGTAGTCTTTTCTCAATCTCGAATTGTTCTTCACTTGTTCGACTTCGTCTAGAAAATAATTCATTCTCCGGTGAAGTCTCTTTAAAATTCAGCCATCTTCCTGATATCACATATGTTGATTTGTCATGGAACAATTTTGTTGGTGGGATTCCCTTGGATATTTCTCAAGCTACTCAATTGGAGTATTTTAATGTCTCTTATAATAACCAATTAGGAGGCATAATCCCTACATTAATATGGTCTTTGCCGCAACTACAAAATTTCTCGGCATCTTCTTGTGGTATTCTCGGCATTCTTCCTTCATTTGACTCCTGCAAATCAATTTCAACAATCGATCTTGGTAGAAACAACTTATCTGGTACAATCTCAAAAAGTGTTTCGAAATGTCAAGCTCTTGTGACAATCGATTTGTCTGACAATAATATGACGGGTCAAATACCCGAGGAGCTTGCAAGTATCCCTATTCTTGAAATTGTAGATTTATCTAACAACAAGTTCAATGGCCCTATACCTGAAAAGTTTGGTAGTTCATCAAGTTTACATCTTCTCAATGTGTCTTTCAACAATATCTCAGGTTCAATACCAAATGCAAAGACATTTAAAATAATGAATGAAAGTGCATTTGTTGGAAACTCGGAGCTATGCGGAGGACCTCTAAGACCATGTTTTGGGAGAGTAGGAACTTGGAAGCTTAAACATATTTTGTTACTCTCTGTAGGGTTGCTAATAATCCTTATGGTATTGGCTTTTGGAATACTTCATTACAGAAAGGAATATAAAAGTCAATGGAAAATGGTTTCATTTGTCGGACTTCCTCAATTCACAGCGAATGACGTCTTGACAAGCTTCAGTGTGGTTGCCACGGAACATACACATATTCCGTCATCACCATCACCTGTAGTTACAAAGGCGGTTCTTCCAACAGGTATAACAGTATTGGTCAAGAAGATTGAATTGGAAAATAGGAGCATCAATGCGGTGTCGGAATTTATAACGAGACTAGGAAATGCAAGACACAAGAATTTAATCAGATTGTTGGGTTTTTGCCACAACCAACAACTAGTTTACCTTTTGTATGATTACTTGCCAAATGGAAACTTGGCCGAGAAAATCGGAATGAAATGGGATTGGTCAGCTAAATTCAGAACAGTGGTCGGAATTGCAAGGGGACTATGCTTTCTTCACCATGAATGTTACCCGGCTATACCCCACGGAGACTTGAAATCTAGCAACGTTGTATTCGATGAAAATATGGAACCCCATTTGGCTGAATTCGGGTTTAAACAAGTCTTACAGTTGACCAATGGCTCATCTCCGACTAAAACTATGCAGGAAACAGAATACAATGAAGTAATGAAAGAGGAACTCAGCAATGATGTCTACAATTTTGGAAAGATGATTCTAGAAATTTTAACCGGCGGAAAGTTGACAAGTGCAGCAACCAACATTCACAGCAATTCGCAGGAGGTTCTTCTAAGAGAAGTTTACAATGGTAATGAAGTGACCTCTGTTGATTCAATGCAAGAGATTAAACTGGTTATTGAGGTTGCTATGCTTTGCACGAAAAGCAGATCATCCGATCGTCCATTCATGGAAGATGCTCTGGAGCTTCTGTCAGGGTTAAAATGTTTAGAAAATGATGAAAGTTCTAAATAA | 2850 | 0.3688 | MEIFKFFFYFINLLFAFILTSSSLAIDPYSKALLSLKSELIDYDNTLHDWMVTSNGNSYACSWSGIKCNKDSIVISIDLSMKKLGGILSGNQLSIFTNVTDFNISYNFFSGKLPQEIFNLTSLKSLDISRNNFSGQFPKGIPKLKNLVVLDAFSNSFSGELPYEFSELDNLKILNLAGSYFSGTIPSEYGSFRKLEFLHLAGNSLSGSIPSELGNLETATHIEIGYNFYQGLIPPQLGNLSQLHYLDIAGANLSGSIPKEFSNLTSLQSLFLFRNQLTGSIPSELSNIKPLTNLDLSDNFLSGSIPESFSELKSLRLLSLMYNDMSGTVPDGIAELSSLETLLIWNNHFSGLLPKSLGKNSKLKWVDVSTNKFNGSIPQDICRGGVLSKLILFSNKFTGSLFSISNCSSLVRLRLENNSFSGEVSLKFSHLPDITYVDLSWNNFVGGIPLDISQATQLEYFNVSYNNQLGGIIPTLIWSLPQLQNFSASSCGILGILPSFDSCKSISTIDLGRNNLSGTISKSVSKCQALVTIDLSDNNMTGQIPEELASIPILEIVDLSNNKFNGPIPEKFGSSSSLHLLNVSFNNISGSIPNAKTFKIMNESAFVGNSELCGGPLRPCFGRVGTWKLKHILLLSVGLLIILMVLAFGILHYRKEYKSQWKMVSFVGLPQFTANDVLTSFSVVATEHTHIPSSPSPVVTKAVLPTGITVLVKKIELENRSINAVSEFITRLGNARHKNLIRLLGFCHNQQLVYLLYDYLPNGNLAEKIGMKWDWSAKFRTVVGIARGLCFLHHECYPAIPHGDLKSSNVVFDENMEPHLAEFGFKQVLQLTNGSSPTKTMQETEYNEVMKEELSNDVYNFGKMILEILTGGKLTSAATNIHSNSQEVLLREVYNGNEVTSVDSMQEIKLVIEVAMLCTKSRSSDRPFMEDALELLSGLKCLENDESSK | 949 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre3g03836 | 949 | Gene3D | Ribonuclease Inhibitor | 291 | 624 | IPR032675 | - | |
Trre3g03836 | 949 | PANTHER | UNNAMED PRODUCT | 13 | 875 | - | - | |
Trre3g03836 | 949 | FunFam | Leucine-rich repeat receptor-like protein kinase | 26 | 187 | - | - | |
Trre3g03836 | 949 | Pfam | Leucine rich repeat N-terminal domain | 31 | 69 | IPR013210 | - | |
Trre3g03836 | 949 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 309 | 621 | - | - | |
Trre3g03836 | 949 | Pfam | Protein tyrosine and serine/threonine kinase | 706 | 934 | IPR001245 | GO:0004672|GO:0006468 | |
Trre3g03836 | 949 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 672 | 759 | - | - | |
Trre3g03836 | 949 | SUPERFAMILY | Protein kinase-like (PK-like) | 697 | 936 | IPR011009 | - | |
Trre3g03836 | 949 | Gene3D | Phosphorylase Kinase; domain 1 | 685 | 757 | - | - | |
Trre3g03836 | 949 | Pfam | Leucine Rich Repeat | 291 | 312 | IPR001611 | GO:0005515 | |
Trre3g03836 | 949 | Gene3D | Transferase(Phosphotransferase) domain 1 | 758 | 948 | - | - | |
Trre3g03836 | 949 | SUPERFAMILY | RNI-like | 76 | 399 | - | - | |
Trre3g03836 | 949 | SMART | serkin_6 | 698 | 936 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre3g03836 | 949 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 760 | 944 | - | - | |
Trre3g03836 | 949 | ProSiteProfiles | Protein kinase domain profile. | 661 | 939 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre3g03836 | 949 | SMART | LRR_typ_2 | 264 | 288 | IPR003591 | - | |
Trre3g03836 | 949 | SMART | LRR_typ_2 | 336 | 359 | IPR003591 | - | |
Trre3g03836 | 949 | SMART | LRR_typ_2 | 120 | 144 | IPR003591 | - | |
Trre3g03836 | 949 | SMART | LRR_typ_2 | 192 | 216 | IPR003591 | - | |
Trre3g03836 | 949 | Gene3D | Ribonuclease Inhibitor | 29 | 183 | IPR032675 | - | |
Trre3g03836 | 949 | Gene3D | Ribonuclease Inhibitor | 184 | 289 | IPR032675 | - | |
Trre3g03836 | 949 | SUPERFAMILY | L domain-like | 309 | 613 | - | - | |
Trre3g03836 | 949 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 800 | 812 | IPR008271 | GO:0004672|GO:0006468 | |
Trre3g03836 | 949 | FunFam | Leucine-rich repeat receptor-like protein kinase | 188 | 279 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre3g03836 | Trre-Chr3 | 49477106 | 49480075 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre3g03836 | 8 | 937 | Receptor kinase-like Gene Family | AT5G51350 | 53.749 | 0.0 | 941 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre3g03836 | PK_Tyr_Ser-Thr | 1.7e-18 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre3g03836 | - | - | aprc:113852384 | 1401.34 |