Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03799 ATGGCTTCCACATCAAATTTTCCAAGTTGCAAGAAGTGTACGGAATTCCTCCAGTACGACATCAACAACATCGACGACACGGCTCCAGGAAACTTCTACAACGACGATCGGAACATTCTCCTCCGCCAGCATGCCGTTTCAGTAATCGCTAAGGTCACAAAGGAGGGTCAAGTCGTTATTACCGACGCACAAGGAACAACAATTCCAGATACATTTGTCCCGTATCTTGCTATGAACTACTTTGATCGCTTCTTATCCCATTGCGACATGACGCATGTGGAAGGTCAGGCGGATATCGAAAAAGTTCGGTTGATTGCTATATCTTGTTACACCTTTTCTGCCCGTTTAAGATCACAAAGCTTCATGGTTAATCGGTTTTTGTCTGACCTAAAGACTAAAAATGCACAGGACATGGATCTTAACTGGATTACTGAAGGCATGGTAAGGACAATGTGGCATTACTTGGAGGAAAAACCTGTAACTGTAACTGCCTTCTGTTTTCTGGACCACTTTAATGCTCACTTCGAACCACCAGGTTTAAAACGCCGTATCCTTAATGAGATCATAGTTCAAGCTCAAGGAGTGCACACCTTCGTTGATTTTATGCCTGCTGACATTGCGTTCTCCGCTTGTGTGGCTGCTGCCACAATTGCACGTCCCTTTGAGAAACTTCCAGAAGACATTAATAATATCATTAACAGCAATATGCCTTGCTTTAATAAAGTGAACCAATGTGTGGGGAAGATGATAACATTTTCCTATATAATGAATATTCTGATTGAGAAAGCAGCAGAAGATATTGAGGAGCCACAGCCACAGCCACAGCCACAGATGGAGCCACCCATGAACTACATGAACTTTGAACTGAAATGGCCTACTGATGTTCCACCACTTGAAGAAGAAAAAGATGCTACAGCAAAACCCAAACTCCTTAGGGTACCTGTTACAGCAGTTGATTCTGCTAAATCTCTGCCTACAGCTATAAGCCTTAGGATACCAGGGACTGCAAAGAATATAAATATAGGCTGCTGTACCTGCAACATCAGTTAG 1050 0.4295 MASTSNFPSCKKCTEFLQYDINNIDDTAPGNFYNDDRNILLRQHAVSVIAKVTKEGQVVITDAQGTTIPDTFVPYLAMNYFDRFLSHCDMTHVEGQADIEKVRLIAISCYTFSARLRSQSFMVNRFLSDLKTKNAQDMDLNWITEGMVRTMWHYLEEKPVTVTAFCFLDHFNAHFEPPGLKRRILNEIIVQAQGVHTFVDFMPADIAFSACVAAATIARPFEKLPEDINNIINSNMPCFNKVNQCVGKMITFSYIMNILIEKAAEDIEEPQPQPQPQMEPPMNYMNFELKWPTDVPPLEEEKDATAKPKLLRVPVTAVDSAKSLPTAISLRIPGTAKNINIGCCTCNIS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03799 349 SUPERFAMILY Cyclin-like 72 127 IPR036915 -
Trre3g03799 349 Gene3D - 73 160 - -
Trre3g03799 349 Gene3D - 161 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03799 Trre-Chr3 48998036 49000071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03799 42 246 Core Cell Cycle Gene Families AT4G03270 27.570 6.68e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03799 K18812 - tpra:123896490 192.971