Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03798 ATGGCTTCCACATCAAATTTTCCAAGTTGCAAGAAGTGTACGGAATTCCTCCAGTACGACATCAACAACATCGACGACACGGCTCCAGGAAACTTCTACAACGACGATCGGAACATTCTCCTCCGCCAGCATGCCGTTTCAGTAATCGCTAAGGTCACAAAGGAGGGTCAAGTCGTTATTACCGACGCACAAGGAACAACAATTCCAGATACATTTGTCCCGTATCTTGCTATGAACTACTTTGATCGCTTCTTATCCCATTGCGACATGACGCATGTGGAAGGTCAGGCGGATATCGAAAAAGTTCGGTTGATTGCTATATCTTGTTACACCTTTTCTGCCCGTTTAAGATCACAAAGCTTCATGGTTAATCGGTTTTTGTCTGACCTAGACATGGATCTTAACTGGATTACTGAAGGCATGGTAAGGACAATGTGGCATTACTTGGAGGAAAAACCTGTAACTGTAACTGCCTTCTGTTTTCTGGACCACTTTAATGCTCACTTCGAACCACCAGGTTTAAAACGCCGTATCCTTAATGAGATCATAGTTCAAGCTCAAGGAGTGCACACCTTCGTTGATTTTATGCCTGCTGACATTGCGTTCTCCGCTTGTGTGGCTGCTGCCACAATTGCACGTCCCTTTGAGAAACTTCCAGAAGACATTAATAATATCATTAACAGCAATATGCCTTGCTTTAATAAAGTGAACCAATGTGTGGGGAAGATGATAACATTTTCCTATATAATGAATATTCTGATTGAGAAAGCAGCAGAAGATATTGAGGAGCCACAGCCACAGCCACAGCCACAGATGGAGCCACCCATGAACTACATGAACTTTGAACTGAAATGGCCTACTGATGTTCCACCACTTGAAGAAGAAAAAGATGCTACAGCAAAACCCAAACTCCTTAGGGTACCTGTTACAGCAGTTGATTCTGCTAAATCTCTGCCTACAGCTATAAGCCTTAGGATACCAGGGACTGCAAAGAATATAAATATAGGCTGCTGTACCTGCAACATCAGTTAG 1032 0.4312 MASTSNFPSCKKCTEFLQYDINNIDDTAPGNFYNDDRNILLRQHAVSVIAKVTKEGQVVITDAQGTTIPDTFVPYLAMNYFDRFLSHCDMTHVEGQADIEKVRLIAISCYTFSARLRSQSFMVNRFLSDLDMDLNWITEGMVRTMWHYLEEKPVTVTAFCFLDHFNAHFEPPGLKRRILNEIIVQAQGVHTFVDFMPADIAFSACVAAATIARPFEKLPEDINNIINSNMPCFNKVNQCVGKMITFSYIMNILIEKAAEDIEEPQPQPQPQMEPPMNYMNFELKWPTDVPPLEEEKDATAKPKLLRVPVTAVDSAKSLPTAISLRIPGTAKNINIGCCTCNIS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03798 343 Gene3D - 74 154 - -
Trre3g03798 343 SUPERFAMILY Cyclin-like 71 127 IPR036915 -
Trre3g03798 343 Gene3D - 155 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03798 Trre-Chr3 48998036 49000071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03798 42 240 Core Cell Cycle Gene Families AT4G03270 28.302 1.92e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03798 K18812 - tpra:123896490 196.052