Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03746 ATGAAGATCATAATTCTCTTTTGCATCACCTTGACATGTGGTTTTCTTGGAAATGTAGTTTCAAATGAAAATCCTCTCCCATATGAAGCTATCTTCAACTTTGGTGACTCTATAAGTGACACTGGGAATGCTATGAAGAGCTTCGGTTCCATGCCTAGCAATAGTCCTTATGGGTTGACATACTTCAAACATCCAGCTGGGCGTTTATCGAATGGACGCCTGATCATAGATTTTATTGCTGAGGCATATGGATTGCCATTTTTGCCCGCCTTACAAAATCTCACCAAAGACCAAGACATTAAGAAAGGGGTGAATTTTGCATTTGCTGGTTCCAGTGCTCTTGAAGTTAAGTTTTTCACACAACATGCAGTCATGCCACCAGCGACTAGCAACTCATTAAGTGTTCAATTAGGTTGGTTTAAGGAGTTAAAACCATCCCTCTGTAAAAGCAAAGAAGAGTGTGATGGGTACTTCAAAAAATCATTGTTTTTTGTTGGGGAGATTGGTGGAAATTAG 516 0.3973 MKIIILFCITLTCGFLGNVVSNENPLPYEAIFNFGDSISDTGNAMKSFGSMPSNSPYGLTYFKHPAGRLSNGRLIIDFIAEAYGLPFLPALQNLTKDQDIKKGVNFAFAGSSALEVKFFTQHAVMPPATSNSLSVQLGWFKELKPSLCKSKEECDGYFKKSLFFVGEIGGN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03746 171 Gene3D SGNH hydrolase 18 171 IPR036514 -
Trre3g03746 171 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 25 171 - -
Trre3g03746 171 Pfam GDSL-like Lipase/Acylhydrolase 31 131 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03746 Trre-Chr3 48345243 48346055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03746 23 111 Pollen Coat Proteome AT1G75930 39.362 5.52e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03746 - - ccaj:109792574 266.929