Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03668 ATGTCTCGCAGCTCTCAAACATGCAACCATGGAAGACAACACAGCATTAAGATTTTCGGTGTGCAACTCACCGGAAGAATTAATGACGATGATGACAACAACAACATCCAACTCTCTGAATACCAACAACCTCTGCCTCAAGTTTCCACTTCCACTGGTACCAGTTATGTCTCCGACAATGTCGTTCATGCCCCGGACCGATCCCGCAAATGCAAACGAGGTGTTCCTTGGACGGAAGAAGAACAAATGTTGTTCTTGAAAGGGTTGAGAGAGACTCGTAAGGGTGATTGGAAAAAAATTTCTAGCAACTATGTTAAAACTCGGACCGCAACTCAGGTTGCAAGTCATGCTCAAAAGCATTTTCTCCACCATTCTAACCAGAACCGCCGCCGCAGGAAACCTAGTGTCTTTGATCTTACCATTAATGAGGTGACAGAATCTTCAACTATTATGGAAAATGAGCAGATTCAGCAAGAAAATGTGGTGCCCCTACCTCCACCAACCCCAACCGCATATCCATCCACACACAATGGTGGCATTCACGACAGCCCTTTACCGATCAGTCTTGTTCCCGTAGCATTGTCGGTGATGCCTATTTCTTGGTTCGACTTGAATAACAATGGATCTTCTTCTTCCACTAAGACTTTTCCACTGTCATTGAAGTTATAA 669 0.4454 MSRSSQTCNHGRQHSIKIFGVQLTGRINDDDDNNNIQLSEYQQPLPQVSTSTGTSYVSDNVVHAPDRSRKCKRGVPWTEEEQMLFLKGLRETRKGDWKKISSNYVKTRTATQVASHAQKHFLHHSNQNRRRRKPSVFDLTINEVTESSTIMENEQIQQENVVPLPPPTPTAYPSTHNGGIHDSPLPISLVPVALSVMPISWFDLNNNGSSSSTKTFPLSLKL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03668 222 ProSiteProfiles Myb-like domain profile. 76 121 IPR001005 -
Trre3g03668 222 PANTHER TRANSCRIPTION FACTOR KUA1 4 170 - -
Trre3g03668 222 Pfam Myb-like DNA-binding domain 76 120 IPR001005 -
Trre3g03668 222 CDD SANT 76 121 IPR001005 -
Trre3g03668 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 125 IPR017930 -
Trre3g03668 222 SMART sant 73 123 IPR001005 -
Trre3g03668 222 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 123 IPR006447 GO:0003677
Trre3g03668 222 SUPERFAMILY Homeodomain-like 71 125 IPR009057 -
Trre3g03668 222 Gene3D - 77 124 - -
Trre3g03668 222 ProSiteProfiles SANT domain profile. 72 125 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03668 Trre-Chr3 47418381 47421171 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre3g03668 Myb_DNA-binding 8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03668 - - tpra:123909419 214.157