Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03641 ATGGAAGATCGACAACAAAAACAGCATGTTCAGTCTCAAAGTTCCAATACCAATAATCCAAACAACACTGAAAAGAGCGAAATTGTGAGATCAAGATGGTCACCAAAACCTGAACAAATCCTTATACTTGAATCCATCTTTAATAGTGGAATGGTTAATCCACCAAAAGATGAAACCGTTAGAATAAGAAAACTTCTAGAAGAGTATGGAGCTGTTGGTGATGCTAATGTTTTTTATTGGTTTCAAAATCGCCGCTCTCGCTCTAGGCGCCGTCAAAGGCAGATGCAGGCCGCCGCTCAACTAATCGGTGGTAGCAGTGCAAATCCATATCACCAATACCATTGCAACACCAATAGTACTAACACTCTGTCTCTTGGTGCTGCAATTGGTATCGGTGGTTCTTCAAATTTCACTATAAATTCTTCATCTTGTAATTCATCTTATGGTAATAAATTTTCGGGTTCATCATCATGCGATGTTGGTATTGGTTTAGGTCTCAGTGTTGGCGGTGCAGGTAGCAGTCGCGGAGAACCAGGGTTTGGTGGTTTGCTCTTAGGTTCTACTCCAAATAATTTTTCTGGAATTGATCATAATTCAGCTGCTTCTTCAATTTTGTATCCTTCTGATCATGCTTCAAATCTCAACTTCCATTTAGGATTTGGGGGGAACAATGTTCCAGATTTGATCATAGTGTTCATCAATGGAGTTCCAACAGAAGTTCCAAGGGGTGCAATTGACATGAAAGCAATGTTTGGTGAAAATGTTATGTTAGTTCATTCCTCTGGTGTCCCTGTTCCAACCAATGAGTTTGGTTTATTGATGCAGAGCTTGCAGCATGGTGAAAGCTACTTTCTGGTTTCAAAGCAAACCCAAGCTTGA 879 0.4027 MEDRQQKQHVQSQSSNTNNPNNTEKSEIVRSRWSPKPEQILILESIFNSGMVNPPKDETVRIRKLLEEYGAVGDANVFYWFQNRRSRSRRRQRQMQAAAQLIGGSSANPYHQYHCNTNSTNTLSLGAAIGIGGSSNFTINSSSCNSSYGNKFSGSSSCDVGIGLGLSVGGAGSSRGEPGFGGLLLGSTPNNFSGIDHNSAASSILYPSDHASNLNFHLGFGGNNVPDLIIVFINGVPTEVPRGAIDMKAMFGENVMLVHSSGVPVPTNEFGLLMQSLQHGESYFLVSKQTQA 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03641 292 Gene3D - 30 98 - -
Trre3g03641 292 MobiDBLite consensus disorder prediction 1 31 - -
Trre3g03641 292 SUPERFAMILY Homeodomain-like 25 98 IPR009057 -
Trre3g03641 292 MobiDBLite consensus disorder prediction 8 28 - -
Trre3g03641 292 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Trre3g03641 292 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 289 IPR044558 GO:0003700|GO:0048830
Trre3g03641 292 FunFam WUSCHEL-related homeobox 11 30 97 - -
Trre3g03641 292 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Trre3g03641 292 SMART HOX_1 28 95 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03641 Trre-Chr3 47070819 47073546 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03641 13 290 Wox Gene Family AT5G17810 48.276 9.77e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre3g03641 Homeodomain 2.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03641 - - aprc:113866574 287.73