Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03640 ATGGAAGATCAAGAACAAAAGCAACATGTTCACTCTCAAAGTTCCAATACCAATAATCCAAACAACACTGAAAAGAGTGAAACTGTGAGATCAAGATGGACACCAAAACCTGAACAAATTCTTATACTTGAATCCATTTTCAATAGTGGAATGGTTAATCCACCAAAAGATGAAACTGTTAGAATAAGAAAACTTCTTGAAAAATTTGGTGCTGTTGGTGATGCTAATGTTTTTTATTGGTTTCAGAATCGTCGCTCTCGCTCTCGTCGCCGTCAAAGGCAGATGCAGGCCGCCGCTCAACTAAGCGGTGACACTGCAAATCCATATCACCAATACCAGTGCAGCACCAATAGTGCTGCTAACACTCTGTCTCTTGGTGCTGCAATTGGTTTTGGTGATTCATCTAATTTCACTATGAATTCTTCTTCTTGTAATTCATCTTATAATAATAACTTTTCCGGTTCTTCTTCATCATGTGGTCTTGGAGTTGGTCTCGGCGTCGGTATTGGCGGTGGCGGAGAAGAAGGGTTTGGTGGTTTGTTCTTAGGTTCTACACCAATTAATTTCCATGAATCTGATCATACCTCAGCTGCTTCATCAGTTTTGTACCCTTCTAATCATGCTTCAAATTTCAACATCCATTCAGGATTTGGGGGGAGCAATGTTTCAAGTTTGATCACAGTGTTGATCAATGGAGTTGCAACAGAAGTTCCAAGGGACACAATTGACATGAAAACAATGTTTGGTGAAGATGTTATGTTAATTCATTCCTCTGGAGTCTCAGTTCCAACCAATGAGTTTGGTTTCTTGATGCAGAACTTGCAACATGGTGAAAGCTACTATCTGGTTTCAAAGCAAACCCAAGCATGA 870 0.4 MEDQEQKQHVHSQSSNTNNPNNTEKSETVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQAAAQLSGDTANPYHQYQCSTNSAANTLSLGAAIGFGDSSNFTMNSSSCNSSYNNNFSGSSSSCGLGVGLGVGIGGGGEEGFGGLFLGSTPINFHESDHTSAASSVLYPSNHASNFNIHSGFGGSNVSSLITVLINGVATEVPRDTIDMKTMFGEDVMLIHSSGVSVPTNEFGFLMQNLQHGESYYLVSKQTQA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03640 289 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Trre3g03640 289 PANTHER WUSCHEL-RELATED HOMEOBOX 11 8 286 IPR044558 GO:0003700|GO:0048830
Trre3g03640 289 MobiDBLite consensus disorder prediction 1 33 - -
Trre3g03640 289 SUPERFAMILY Homeodomain-like 24 98 IPR009057 -
Trre3g03640 289 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Trre3g03640 289 MobiDBLite consensus disorder prediction 10 28 - -
Trre3g03640 289 FunFam WUSCHEL-related homeobox 11 30 97 - -
Trre3g03640 289 Gene3D - 30 98 - -
Trre3g03640 289 SMART HOX_1 28 95 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03640 Trre-Chr3 46950716 46954747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03640 3 288 Wox Gene Family AT3G03660 51.864 1.85e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Trre3g03640 Homeodomain 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03640 - - lang:109335690 278.485