Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03567 ATGGATACCGGAATTACAGGATATAAACGTCTGAAAAATCCTGAGGAGAAAAAGTTGCGGATCAAAAAGCGCAAATTAATTGACATTCCTAATCGCATCAATGCATTACTAGTAGATGGTGTAACCTCATCCAGACGTTTGGAACATCACATGCTTGAATCAATAGGAATTCGAACTGAGCCTGCAAATAATGCTCAAGAAGCAATACAAATTTTGTTGACTGGTGTGAAATTTGACTTCATATTTGTTGATTTTGATTTGTCAATAATCAGTGGACCTGAGCTTGTGACGCAAATGCGTGCAATGGGGGTACAAAGTAAAGTGGTGGGTATGCTAACAAACTTCAATGATCATAATGTACAAATGTTTCATGATGCAAGAGCAAATGCAAGTATTCAGAAACCTTTGACTCGAGAAAGTTTTGAAATCATCACCGGAATCCTTCGCTATATATGA 456 0.3728 MDTGITGYKRLKNPEEKKLRIKKRKLIDIPNRINALLVDGVTSSRRLEHHMLESIGIRTEPANNAQEAIQILLTGVKFDFIFVDFDLSIISGPELVTQMRAMGVQSKVVGMLTNFNDHNVQMFHDARANASIQKPLTRESFEIITGILRYI 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03567 151 SUPERFAMILY CheY-like 32 141 IPR011006 -
Trre3g03567 151 PANTHER TWO-COMPONENT RESPONSE REGULATOR 31 142 - -
Trre3g03567 151 Pfam Response regulator receiver domain 36 139 IPR001789 GO:0000160
Trre3g03567 151 Gene3D - 29 148 - -
Trre3g03567 151 ProSiteProfiles Response regulatory domain profile. 34 149 IPR001789 GO:0000160
Trre3g03567 151 SMART REC_2 33 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03567 Trre-Chr3 46045414 46046433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03567 22 138 Response Regulator Gene Family AT3G04280 31.405 5.31e-10 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre3g03567 Response_reg 1e-09 CL0304