Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03561 ATGGATTTCACATCAGGGAAGAATTCATCAGAGAACAACAACAATAACGCTGAAAACGCTAACCAAATCGTTGATTCTTCTTCTCAATTTGCATCTGATTCCTACAATGTCAAAGAAACCGAAGAGCGTCAAGCTCGTGAACTCAAAGCTGGTCTTCACCCTCTCAAGACCAAATTTGTATTTTGGTATACTCGCCGGGTACCTGGAATTCGAAATCAATCATATGAGGACAACATTAAGAAGATTGTTGAATTTAGTACGGTTGAAGGATTTTGGGTCTCTTATTGCCATCTTGCTCGTCCTTCTGCTTTGCCTAGTCCAACAGATCTGCACCTTTTCAAAGAAGGAATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGAAAATGGATTATTCGATTCAAAAAGCCTGTCTCAGGTCGTTTTTGGGAGGACCTGGTGCTTGCCTTAGTGGGTGACCAATTAGATTATGGTGATAACATATGTGGTGCAGTACTTAGCATTCGGTTCAACGAGGATATAGTGAGTGTTTGGAATCGCAATGCATCTGATCATCAGGCTGTTATGGCTTTGAGAGATTCAATCAAGCGTCACCTGAAGCTTCCTCACGGCTATGTTATGGAGTACAAGCCCCATGATGCTTCTCTGAAAGACAATTCATCTTACAGGAATACTTGGTTGAGAGGCTAG 696 0.4224 MDFTSGKNSSENNNNNAENANQIVDSSSQFASDSYNVKETEERQARELKAGLHPLKTKFVFWYTRRVPGIRNQSYEDNIKKIVEFSTVEGFWVSYCHLARPSALPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKPVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSVWNRNASDHQAVMALRDSIKRHLKLPHGYVMEYKPHDASLKDNSSYRNTWLRG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03561 231 FunFam Eukaryotic translation initiation factor NCBP 25 224 - -
Trre3g03561 231 Gene3D RNA Cap, Translation Initiation Factor Eif4e 24 224 IPR023398 -
Trre3g03561 231 SUPERFAMILY eIF4e-like 44 227 IPR023398 -
Trre3g03561 231 MobiDBLite consensus disorder prediction 1 29 - -
Trre3g03561 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 31 221 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre3g03561 231 Pfam Eukaryotic initiation factor 4E 54 211 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre3g03561 231 ProSitePatterns Eukaryotic initiation factor 4E signature. 109 132 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03561 Trre-Chr3 46007219 46009977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03561 21 231 Eukaryotic Initiation Factors Gene Family AT5G18110 78.404 2.35e-126 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03561 K03259 - gmx:100499744 401.364