Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03455 ATGGCACCAAAAAACATCAAAGAAGAGAATCAAAGAATAGTCTTCACCGAAGAAGACGATCTTATAATTTTAAAAGCTATTCCGAAGTTTATGTCCGAAACCGGAGAGACTGCCTATTCTCATGATTTTCACACTTTTGTGAAAAATAAGGTTCGTGGTAAAATAAGCTTCAAACAATTGAATCGAAAGATTCGCGGTTTCAAGACAAAGTATGGAAAAGAAGGTAAAACCTTCACTAAAACTCATGAAAAGAAAGCTTTGAAGCTTTTCATGAAGATTGATTGGGGAACAAAGGGTGGAAGTAAATCTGGAAATCTGTCTTCTGGCTTAGTTAACTTCAATTTAGGAACATGA 354 0.3503 MAPKNIKEENQRIVFTEEDDLIILKAIPKFMSETGETAYSHDFHTFVKNKVRGKISFKQLNRKIRGFKTKYGKEGKTFTKTHEKKALKLFMKIDWGTKGGSKSGNLSSGLVNFNLGT 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03455 117 Pfam Protein of unknown function, DUF573 14 93 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03455 Trre-Chr3 44722318 44723640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03455 11 109 GeBP Transcription Factor Family AT1G66420 40.196 3.18e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre3g03455 DUF573 1.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03455 - K03797 cam:101512869 60.4622