Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03450 ATGGCACCAAAAAACATCAAAGAAGAGAATCAAAGAATAGTCTTCACCGAAGAAGACGATCTTATAATTTTAAAAGCTATTCCGAAGTTTATGTCTGAAACCGGAGAGACTGCCTATTCTCATGATTTTCACACTTTTGTGAAAAATAAGGTTAGTGGTAAAATAAGCTTCAAACAATTGAATCGAAAGATTCGCGGTTTCAAGACAAAGTATGGAAAAGAAGGTGAAACCTTCACTAAAACTCATGAAAAGAAATCTTTGAAGCTTTTCATGAAGATTGATTGGGGAACAAAGGGTGGAAGTAAATCTGGAAGTAAATCTGCGGAAAAGGAAAATCAAGATCTGTCTTCTGGCTTAGTTAACTTCAATTCAAGGAACATGACCGAGCTATCTTTTTGCCCACTTCTTTCCTTGTGTCGCTTCTCCTTAAATACTGTTTGA 441 0.3583 MAPKNIKEENQRIVFTEEDDLIILKAIPKFMSETGETAYSHDFHTFVKNKVSGKISFKQLNRKIRGFKTKYGKEGETFTKTHEKKSLKLFMKIDWGTKGGSKSGSKSAEKENQDLSSGLVNFNSRNMTELSFCPLLSLCRFSLNTV 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03450 146 PANTHER BNAANNG10740D PROTEIN-RELATED 9 114 IPR007592 GO:0006355
Trre3g03450 146 Pfam Protein of unknown function, DUF573 14 93 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03450 Trre-Chr3 44655171 44656939 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03450 11 99 GeBP Transcription Factor Family AT1G61730 37.895 5.16e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre3g03450 DUF573 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03450 - K03568 cam:101512869 63.929