Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03448 ATGGCACCACCCAGCTCTGACTCTTCCTCCGACGGCGACGCTAATAAGTACATTGTACTATCTTCATCCCAAAAACAATCTGTTTTTGATGTTTCTGTCGAAGAAGATATAGGCGAGAAAGATTCACTAACAGATGAAGATTCTTCATCGGAAGAACAAGAAGAAGAAGTCACTGCTCCTTCTAACTCAAAACCCAAACCACTTGCTTCCAAGACCAGGAAGAAGCGTGTTGTCGACGACAACGATGCTAATGGAACTAAACGCTCTAAGAAGAAAAAATATGTTACAACTGCTAATTCCGGAAGAGTATTCACTGACGAAGAGGGTCTTGTTATTCGGAATGGCATTGCTGATTTTATTTCCGAAACTGGAAATAATCCTTTGAAGAATTCAAAAGATTTTCACAATTTTATGAAAGATTGCGTTCGTGCTGAGATAACTACCAAACAACTTAAACGTAAGGTTCGTGATTTTAAGGAGAAGTTTGAAAAGGGTAAATGGAAATATGATGATGATAAGACAACTTTTGAACTTTTCGAGAAGATTGGTTGGAGAAATAACAGTGGGAAAGAAGCTGAAAAAGGAAAGGAAAAAGTTGTTCCTGAGAAAAGTGATGATGATGATGATATTTGTTTCCTTTTGAATGAAATGTTTAGGTTTGGTAATGATATGGGTTTGTGTACTAAGGAGGTTGCAAAAAAAGGATTGAAATTGATTGGGGATTCCAAAAGGGATGAACTGATGGTTAAGTGGAGACAGGTTCGTATTGCAGCAATGAAGGTGTTGGCGGATCGGGCTGAGTTGGCAAATGATCAGGCCAACTTGATATTGAAGGAACTCAAGAAATCGACCAATTAG 858 0.3846 MAPPSSDSSSDGDANKYIVLSSSQKQSVFDVSVEEDIGEKDSLTDEDSSSEEQEEEVTAPSNSKPKPLASKTRKKRVVDDNDANGTKRSKKKKYVTTANSGRVFTDEEGLVIRNGIADFISETGNNPLKNSKDFHNFMKDCVRAEITTKQLKRKVRDFKEKFEKGKWKYDDDKTTFELFEKIGWRNNSGKEAEKGKEKVVPEKSDDDDDICFLLNEMFRFGNDMGLCTKEVAKKGLKLIGDSKRDELMVKWRQVRIAAMKVLADRAELANDQANLILKELKKSTN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03448 285 MobiDBLite consensus disorder prediction 39 54 - -
Trre3g03448 285 MobiDBLite consensus disorder prediction 72 89 - -
Trre3g03448 285 Pfam Protein of unknown function, DUF573 102 174 IPR007592 GO:0006355
Trre3g03448 285 Coils Coil 263 283 - -
Trre3g03448 285 MobiDBLite consensus disorder prediction 1 98 - -
Trre3g03448 285 PANTHER BNAANNG10740D PROTEIN-RELATED 41 279 IPR007592 GO:0006355
Trre3g03448 285 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03448 Trre-Chr3 44622838 44623695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03448 53 162 GeBP Transcription Factor Family AT1G61730 24.107 8.33e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre3g03448 DUF573 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03448 - K20093 tpra:123884067 170.629