Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03446 ATGGCACCACCCAGCTCTGACTCTTCCTCCGACGGCGACGCTAATAAGTACATTGTACTATCTTCATCCCAAAAACAATCTGTTTTTGATGTTTCTGTCGAAGAAGATATAGGCGAGAAAGATTCACTAACAGATGAAGATTCTTCATCGGAAGAACAAGAAGAAGAAGAAGTCACTGCTCCTTCTAACTCAAAACCCAAACCACTTGCTTCCAAGACCAGGAAGAAGCGTGTTGTCGACGACAACGATGCTAATGGAACTAAACGCTCTAAGAAGAAAAAATATGTTACAACTGCTAATTCCGGAAGAGTATTCACTGACGAAGAGGGTCTTGTTATTCGGAATGGCATTGCTGATTTTATTTCCGAAACTGGAAATAATCCTTTGAAGAATTCAAAAGATTTTCACAATTTTATGAAAGATTGCGTTCGTGCTGAGATAACTACCAAACAACTTAAACGTAAGGTTCGTGATTTTAAGGAGAAGTTTGAAAAGGGTAAATGA 504 0.3889 MAPPSSDSSSDGDANKYIVLSSSQKQSVFDVSVEEDIGEKDSLTDEDSSSEEQEEEEVTAPSNSKPKPLASKTRKKRVVDDNDANGTKRSKKKKYVTTANSGRVFTDEEGLVIRNGIADFISETGNNPLKNSKDFHNFMKDCVRAEITTKQLKRKVRDFKEKFEKGK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03446 167 MobiDBLite consensus disorder prediction 39 57 - -
Trre3g03446 167 Pfam Protein of unknown function, DUF573 103 165 IPR007592 GO:0006355
Trre3g03446 167 MobiDBLite consensus disorder prediction 1 100 - -
Trre3g03446 167 MobiDBLite consensus disorder prediction 73 90 - -
Trre3g03446 167 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03446 Trre-Chr3 44607260 44607763 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03446 87 163 GeBP Transcription Factor Family AT1G61730 27.848 1.69e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre3g03446 DUF573 1.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03446 - K14826 tpra:123884067 110.153