Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03444 ATGGCACCAAAAAGCATCAAAGAAGAGAATCAAAGAACAGTCTTCACCGAAGAAGACGATCTTTTAATTTTAAAAGTTATTCCGAAGTTTATGTTAAAAACCGGAAAGACTCCCTATTCTCTTGATTTTCACACTTTTGTGAAAAATAAAGTTCACGGTAAAATAAGCTTCAAACAATTGAATCGAAAGATTCGTGGTTTCAAGACAAAATATGGAAAAGAAGGTAACACCTTCACTAAAACTCATGAAAAGAAAGCTTTGAAGCTTTTCAAGAACATTGATTGGGATACAAAGGGTGGAAGTAAATCTGGAAGTAAATCTGCGAAAAAGGAAAATCAAGATCTGTCTTCTGACTTAGTTAACTTCAATTCAGGAACATGA 381 0.3333 MAPKSIKEENQRTVFTEEDDLLILKVIPKFMLKTGKTPYSLDFHTFVKNKVHGKISFKQLNRKIRGFKTKYGKEGNTFTKTHEKKALKLFKNIDWDTKGGSKSGSKSAKKENQDLSSDLVNFNSGT 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03444 126 Pfam Protein of unknown function, DUF573 13 93 IPR007592 GO:0006355
Trre3g03444 126 MobiDBLite consensus disorder prediction 95 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03444 Trre-Chr3 44528806 44529890 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03444 11 99 GeBP Transcription Factor Family AT1G61730 41.053 6.50e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre3g03444 DUF573 5.6e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03444 - K14787 cam:101512869 74.7146