Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03361 ATGGAAACTTCCAAAAACAATAAAGTGGAGAAAAGAACTTATGATGTAGTTAATGATGATGATGATGATGATGATACACAACACCATCTTGCTCAGTCCAAGAAGCCAAAACTACCTGGTTTAGCCAGTGTAATTGTGGAAGCTTTGAAGGTTGATAGTTTGCAAAGACTCTGCTCATCTTTGGAACCACTTCTCAGAAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCGAAATTGGACCATGCCAAACTCGGTGATAGGTCTTCATTACAAAGAATAGAAGCGCCAAGGGAAAAGAATCTGCAGCTTCATTTCAGAACAAGAATGCCACCACACTTGTTCACAGGAGGGAAAGTTGAGGGAGAGCAAGGAGCGGTCATCCATGTTGTTTTGTTAGATCCGAACACCGGCAATGTTGTTCAAGTTGGACCAGAATCAGTTGCGAAGTTGAATGTTGTTGTACTCGAAGGTGATTTTAATGATGAAGTTGATGATGATTGGACAAAAGAGCACTTTGAAAGTCATGAGGTAAAGGAACGCGACGGGAAAAGGCCACTTTTAAATGGAGATTTTCATGTTAGCTTAAAGGAAGGAGTAGGAACATTAGGTGATCTTTCTTTCACCGACAATTCTAGCTGGATAAGAAGCAGAAAATTCAGGCTTGGTGTTACGGTGGCTCCTGGGTATTGTGACGGAATTCGAGTGCGTGAGGGAAAGACCGAAGCATTTGCTGTTAAAGATCATAGAGGAGAATTATACAAGAAACACTATCCACCTGCTTTGCATGATGAAGTTTGGAGATTGGATCGGATAGCGAAGGATGGTGCACTTCACAAAAAATTGATTCAATCAAGAATAGTAACTGTAGAAGATTTCCTGCGTCTTCTTGTCCGCGAACCTCAGAAATTAAGAAGCATACTTGGCAGTGGAATGTCAAACAGAATGTGGGATAACACTGTGGAGCATGCAAAGACATGTGTCTTGGGTACTAAGCTATTTATTTACTACACTGATGAAACTAATAGCACTGGAATTATGTTTAACAACATTTATGAGCTGAGAGGCCTCATTGCAGATGGCCAGTTCTACTCTTTAGAATCCCTTACTCCAAATCAAAAGATGTCTGTGGATTCTTTGGTGAAAAAAGCATATGATAATTGGGACCAAGTCATAGAATATGATGGAAAAGTTTTAAATTCTTTGACTAATTCAAAAAGGGGATCAAGATCTGTAGCAACTCATACAATAATGCATCACAACGATTTCCAAGAGCAGCAGTACAAATCTGCGAAGGGAAGAGCGTCCTATGTCTTATCCGAACCAAATCAACATTTACAAATAACAAATAACTACTCATTAAATCCTGATTATCAGATGGTTGGGACATCGATAAATGACTCACAAATAGCATTACAAGGAACCATGAATTACAATATGATAAGTGATAATAATCCTGAAAACGGAGGTAGTTATTATCACGGAGACTGGTCTAGGCAAAGAAATGGACAAGGGTTGGAAGACATTGTCGCCGAAGAGCTTCGACTTAGAAGCTCACAGATGCTGGAGGGTGATGATATGCAGAGGTTACTTAAGACAATTAATGAAGGGACTAACTTTGGTCATTCTAATGAGAGTTGTTACACCTACAGACTTCAGTATGAGCCTCAAATGTATCATTCGTTTGTCGAGGATCCTGTCAAATGCTCGGGGAAGGCCGTTGTTGGGTGGCTTAAGCTCAAAGCAGCTTTAAGGTGGGGAATATTTATCAGAAAAAAAGCTGCAGAAAGAAGAGCACAGCTTACTGAGTTGAATTGA 1818 0.401 METSKNNKVEKRTYDVVNDDDDDDDTQHHLAQSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKLDHAKLGDRSSLQRIEAPREKNLQLHFRTRMPPHLFTGGKVEGEQGAVIHVVLLDPNTGNVVQVGPESVAKLNVVVLEGDFNDEVDDDWTKEHFESHEVKERDGKRPLLNGDFHVSLKEGVGTLGDLSFTDNSSWIRSRKFRLGVTVAPGYCDGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQSRIVTVEDFLRLLVREPQKLRSILGSGMSNRMWDNTVEHAKTCVLGTKLFIYYTDETNSTGIMFNNIYELRGLIADGQFYSLESLTPNQKMSVDSLVKKAYDNWDQVIEYDGKVLNSLTNSKRGSRSVATHTIMHHNDFQEQQYKSAKGRASYVLSEPNQHLQITNNYSLNPDYQMVGTSINDSQIALQGTMNYNMISDNNPENGGSYYHGDWSRQRNGQGLEDIVAEELRLRSSQMLEGDDMQRLLKTINEGTNFGHSNESCYTYRLQYEPQMYHSFVEDPVKCSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLTELN 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03361 605 MobiDBLite consensus disorder prediction 1 36 - -
Trre3g03361 605 Pfam Calmodulin binding protein central domain 261 327 IPR046830 -
Trre3g03361 605 Pfam Calmodulin binding protein-like N-terminal domain 102 249 IPR046831 -
Trre3g03361 605 Pfam Calmodulin binding protein C-terminal domain 332 394 IPR046829 -
Trre3g03361 605 PANTHER OS02G0177800 PROTEIN 11 527 IPR012416 GO:0005516
Trre3g03361 605 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03361 Trre-Chr3 42454071 42457209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03361 1 605 Calmodulin-binding Proteins AT2G24300 59.558 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03361 - - tpra:123882842 1157.13