Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03357 ATGATTGGCAGGTTTGCAGAACACGGACTTCGTTCTCTTGGGGTTGTAAGACAGGTAGTACCTGAGGGTACTAAGGACAGTCCAGGAGGACCATGGGAGTTTGTTGCCCTTCTTCCTCTTTTTGACCCTCCTCGCCATGATAGGGCAGAAACAATTAGAAGAGCTATTGATCTTGGTGTTAGTGTCAAAATGATCACCGATATGTAA 207 0.4589 MIGRFAEHGLRSLGVVRQVVPEGTKDSPGGPWEFVALLPLFDPPRHDRAETIRRAIDLGVSVKMITDM 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03357 68 Gene3D - 42 66 IPR023214 -
Trre3g03357 68 PANTHER CALCIUM-TRANSPORTING ATPASE 2 66 - -
Trre3g03357 68 Gene3D - 2 41 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03357 Trre-Chr3 42284989 42285286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03357 2 66 Primary Pumps ATPases AT2G18960 80.000 1.05e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03357 K01535 - zju:107424240 120.553