Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03293 ATGGCCGCGTCTGCTTCTACCACCGCTTCTCATTTCCTTCGCCCTCTTTATCCATTCAAATTCCCTAAATGCCCTCACCTTTTATCAGATTCACACTTTCGCCCTCGCCTACTACTCACTTCCCAAACCCAAACAACCACCACCATTCGTGCTGTTGTTGTGGACTCGGATTTAAGTACAAAGCAGGATCAGGGATCACAAGTTGATTTATTCGCATGTCCGATATGTTATGAACCATTGATAAGAAAAGGTCCTATTGGCCTCAACTTACCAGCAATCTACAGGTCTGGTTTCAAGTGTAAGAGATGTCAAAAATCATACACTAGCAAAGACGGGTATTTGGACCTGACAGTGACTTCTGGGTTGAGAGATTATATTGAAGTTCAACCTGTTAGGACTGAACTTTTTAGGAGTCCCCTTGTTTCATTCTTATATGAAAGAGGTTGGCGCCAGAATTTTAGGCAAAGTGGCTTTCCTGGTCTGGATGAAGAGTTCAAAATGGCTCAAGAGTACTTTGAACCAGCTAAAGGTGGTCTGGTTGTCGATGTTAGCTGTGGAAGTGGTTTGTTTTCCCGAAAATTTGCAAAATCTGGAACGTATTCTGGAGTCATTGCACTAGATTTTTCAGAAAATATGCTTCGTCAATGCTACAATTTCATTAAGAAAGATGACACACTTTCAACCACTAATATTGCCCTTGTAAGAGCTGATGTTTCTAGGCTTCCCTTTGAGTCAGGTTCGGTTGATGCTGTTCATGCTGGTGCCGCATTGCATTGCTGGCCATCTCCCTCCAACGCTGTTGCTGAAATCACCCGTGTACTAAGAAGCGGTGGAGTATTTGTCGGAACCACTTTTCTTCGTTATACTTCATCAACTCCCTGGATTGTACGACCCTTCAGAGAGAGAAATTCTCAAGGCTATGGATTTTTAACGGAGGAAGAAATTAAAGACCTTTGCACCTCATGTGGTCTTACAAATTACTCATGCAAAATTGACAAGTCTTTTATTATATTTACGGTTCAGAAGCCATAA 1032 0.4215 MAASASTTASHFLRPLYPFKFPKCPHLLSDSHFRPRLLLTSQTQTTTTIRAVVVDSDLSTKQDQGSQVDLFACPICYEPLIRKGPIGLNLPAIYRSGFKCKRCQKSYTSKDGYLDLTVTSGLRDYIEVQPVRTELFRSPLVSFLYERGWRQNFRQSGFPGLDEEFKMAQEYFEPAKGGLVVDVSCGSGLFSRKFAKSGTYSGVIALDFSENMLRQCYNFIKKDDTLSTTNIALVRADVSRLPFESGSVDAVHAGAALHCWPSPSNAVAEITRVLRSGGVFVGTTFLRYTSSTPWIVRPFRERNSQGYGFLTEEEIKDLCTSCGLTNYSCKIDKSFIIFTVQKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03293 343 FunFam Putative methyltransferase, chloroplastic 136 342 - -
Trre3g03293 343 CDD AdoMet_MTases 180 286 - -
Trre3g03293 343 Pfam Methyltransferase domain 181 281 IPR013216 GO:0008168
Trre3g03293 343 PANTHER METHYLTRANSFERASE 75 328 - -
Trre3g03293 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 335 IPR029063 -
Trre3g03293 343 Gene3D Vaccinia Virus protein VP39 136 339 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03293 Trre-Chr3 41200675 41207979 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre3g03293 Methyltransf_11 6.1e-21 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03293 - - gmx:100798970 552.362