Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03292 ATGTTAACTCTAAAAGGAGGGAGCAGACCACCATGGGTAGGTTTAGGAGCAGCAGTTTGGGTTCAAATAGCTTCAGGAAACACCTTTACTTTTCCGTTGTACTCACACTCTTTGAAATCTGTCTTAGGTTTCAATCAAAGACAAGTTACACTACTTGGTGTTGCTAATGATATTGGTGAAAACGTTGGTTTGTTACCTGGTATTGCTTGTAATACCTTACCACCTTGGCTCATACTTTCTGTCGGTGCTTTTGCTTCTTTCATTGGTTATGGTCTTCTTTGGCTTTCTGTTACTCAAACACTCACTAATCTTCCTTACTTGTTGCTTTGGTTTGCCCTTGTTATTGCTTCCAACAGTAGTGCATGGTTAACCACTGCCGTTCTTGTAACCAACATGCGAAATTTCCCTGTAAGTCGAGGCAAAGTTGCGGGAATCCTTAAAGGTTATGGAGGGCTTAGTGCTGCTGTTTTCACCGAAATTTACAGCTTACTGCTTCATAATTCTTCTTCTAAGTTCCTCTTGTTGCTTGCTATTGGTATTCCAGTTGTTTGTTTCAGCATGATGTTTCTTGTTAGGCCATGTACACCAGCATTGGATGAAGACTCGACATCTAACTCTCATTTTATATTTATCCAGTGTTCTAGTGTTGTCTTGGGTGTATATCTTCTCGCAACTACAATATTCGGCAATCTTCTTCCATTAAGTGGTACAGTTTCCTATATTTTGATTGCTGTCATGATTGTTCTTCTCATGGCTCCAATTGCTGTCCCTATAAAGATGACATTGTATCGTAAGTCAATTTCAAATTCTGAGGAACGAGTTGGATCTTCTGACTCTCTCAGTCAAGGCAACAATGACAAAATAGAGCCACTGCTAGGATCTTCATCGGCAGGAGCACTTGGAAGCTCGAACGATCAGGATGATTCATCTGAAGTAGCTATGCTTCTTGCGTTAGGTGAGGGAGCGATAAAGCAGAAGAAGAGGAAACCTAAACGCGGGGAAGATTTTAAGTTTACTGAGGCTATAGTTAAGGCTGATTTCTGGCTACTGTTTATTGTTTATTTTGTTGGCGTTGGCACTGGAGTTACTGTTCTCAATAATCTAGCCCAAATAGGTATTGCTCAAGGTGAAGAAGATACTACAACCTTACTGTCAATTTTCAGTTTTTGCAATTTTGTTGGTCGGCTCGGTGGAGGAGTTGTTTCGGAGCATTTTGTCAGGACGAAATTAATCCCAAGGACATTCTGGTTGACATGCACACAGACAGTCATGCTATTGGTATACCTTCTGTTTGCCTTTGCTATCAACGGAACCCTTTATCCTGCAGTTGCATTTCTCGGTGTTTGCTATGGCGTACAAGTTTCCATAATGATCCCAACTGTTTCCGAGCTTTTTGGTCTGAAGAACTTTGGTGTATTAAGCAATGTGATGTCGTTGGGAAATCCACTTGGAGCAACCCTTTTCTCAGCATTGCTTGCAGGTTCTATATATGATACTGAGGCAGCAAAGCAGCATGGTATTAACCTCGTTGCATCTGGTGCTTCCTGCATCGGCGCAAATTGCTTTAAGCTGACATTTTTCATTCTTTCTGGTGTTTGTGGTGCTGGAATCATGTTGAGCATTATTCTCACTTTGAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGAGGTTCTTTCAGAGTTCCTCAAACAACTCCGAGTCGGTAA 1710 0.4129 MLTLKGGSRPPWVGLGAAVWVQIASGNTFTFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNTLPPWLILSVGAFASFIGYGLLWLSVTQTLTNLPYLLLWFALVIASNSSAWLTTAVLVTNMRNFPVSRGKVAGILKGYGGLSAAVFTEIYSLLLHNSSSKFLLLLAIGIPVVCFSMMFLVRPCTPALDEDSTSNSHFIFIQCSSVVLGVYLLATTIFGNLLPLSGTVSYILIAVMIVLLMAPIAVPIKMTLYRKSISNSEERVGSSDSLSQGNNDKIEPLLGSSSAGALGSSNDQDDSSEVAMLLALGEGAIKQKKRKPKRGEDFKFTEAIVKADFWLLFIVYFVGVGTGVTVLNNLAQIGIAQGEEDTTTLLSIFSFCNFVGRLGGGVVSEHFVRTKLIPRTFWLTCTQTVMLLVYLLFAFAINGTLYPAVAFLGVCYGVQVSIMIPTVSELFGLKNFGVLSNVMSLGNPLGATLFSALLAGSIYDTEAAKQHGINLVASGASCIGANCFKLTFFILSGVCGAGIMLSIILTLRIKPVYQMLYAGGSFRVPQTTPSR 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03292 569 SUPERFAMILY MFS general substrate transporter 11 198 IPR036259 -
Trre3g03292 569 CDD MFS_Mch1p_like 10 537 - -
Trre3g03292 569 Gene3D MFS general substrate transporter like domains 342 553 IPR036259 -
Trre3g03292 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 552 - -
Trre3g03292 569 Pfam Nodulin-like 11 258 IPR010658 -
Trre3g03292 569 SUPERFAMILY MFS general substrate transporter 221 549 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03292 Trre-Chr3 41189192 41192534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03292 2 566 Nodulin-like Gene Family AT1G80530 55.732 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03292 - - gmx:100794012 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g03292 3 41189192 41192534 Trre3g03292 3 41189192 41192534 ECH
Trre15g04614 15 56820287 56823322 Trre3g03292 3 41189192 41192534 PCT