Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g03259 ATGGCTTACTTGGAAACTACAATGGAAATGGTTGATGCGATGAAGAATGTTGCTAAGCTTGATGTTGAATTGACTGTTGAAGAGAGAAATCTGTTGTCTGTTGCTTATAAGAATGTTGTTGGAGCACGTAGGGCTTCTTGGAGGATTCTTTCCTCGATTGAACAAAAAGAAGAAGGGAAAGGGAATGAGGCTAATGTGAATCGGATTAAAGAGTATAGGAAAAAGGTTTAA 231 0.381 MAYLETTMEMVDAMKNVAKLDVELTVEERNLLSVAYKNVVGARRASWRILSSIEQKEEGKGNEANVNRIKEYRKKV 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g03259 76 SUPERFAMILY 14-3-3 protein 5 76 IPR036815 -
Trre3g03259 76 Gene3D - 2 76 IPR036815 -
Trre3g03259 76 PRINTS 14-3-3 protein zeta signature 23 52 IPR000308 -
Trre3g03259 76 PRINTS 14-3-3 protein zeta signature 72 76 IPR000308 -
Trre3g03259 76 ProSitePatterns 14-3-3 proteins signature 1. 29 39 IPR023409 -
Trre3g03259 76 Pfam 14-3-3 protein 5 76 IPR023410 -
Trre3g03259 76 PANTHER 14-3-3 PROTEIN 5 76 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g03259 Trre-Chr3 40802570 40803532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g03259 9 76 14-3-3 family AT1G34760 82.353 2.97e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g03259 K06630 - psom:113297024 122.864