Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02860 ATGGCTGATATTGACAATGAGAAATTATTATTGAAATTCAGGAACCGCGTTAACAGAGTTGGAATTAAGATGCCTACAATCGAAGTTCGGTTTAAGCACATGAAGATCAAAGCAGAAGTTCACGTAGGAAAGAGAGCTTCGCCTACCCTCACTAATTACATACTTGATATGGTAGAGGCTCCATTAAACTATATACTAAGAAGAAGAAGACAACAAGTGAACATTCTCAAGAATGTTAGTGGAATAATAAAGCCTGGCAGGATGACATTGTTGTTAGGCCCTCCAAGTTCTGGAAAAACAACACTCCTTTTGGCCTTGGCTGGAAATCTTGATCCCAAGCTAAAGTTCTCTGGGAAGGTGACTTATAATGGTCATGAGATGAATGAGTTTGTACCTCAAAGAACTGCTGCTTATGTCAGTCAAAACGATCTTCACATTGGAGAATTGACAGTTAGAGAAAATTTGGAATTCTCAGCTAGATTCCAAGGTGTTGGACTTAGATATGCTATTGCAACTGGAGGCCGAAAATCAAATTTTGTAATAGATTATTACTTAAAGATTTTGGGACTAGAGACCTGTGCAGATACTGTGGTGGGAAATGCAATGTTAAGAGGTGTCTCTGGAGGACAAAGGAAACGGGTTATGACAGGGGAGATGCTAGTAGGAACATCTAAGGCTCTTTTCATGGATGAAATATCTACTGGTTTGGATAGCTCGACAACTTTTCAAGTTGTGCAATCAGTGAAGCAGTTTCATGTGTCCGAAAAGAAAATCTGTGGCAGACTTTTTACAAGAAGTGACATCAATGAAAGATCAGGAGCAATATTGGGCAGAAAGAGGGAAGCCTTATAG 852 0.3944 MADIDNEKLLLKFRNRVNRVGIKMPTIEVRFKHMKIKAEVHVGKRASPTLTNYILDMVEAPLNYILRRRRQQVNILKNVSGIIKPGRMTLLLGPPSSGKTTLLLALAGNLDPKLKFSGKVTYNGHEMNEFVPQRTAAYVSQNDLHIGELTVRENLEFSARFQGVGLRYAIATGGRKSNFVIDYYLKILGLETCADTVVGNAMLRGVSGGQRKRVMTGEMLVGTSKALFMDEISTGLDSSTTFQVVQSVKQFHVSEKKICGRLFTRSDINERSGAILGRKREAL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02860 283 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 281 IPR003439 GO:0005524
Trre3g02860 283 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 2 170 - -
Trre3g02860 283 Pfam ABC-transporter N-terminal 5 52 IPR029481 -
Trre3g02860 283 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 252 IPR027417 -
Trre3g02860 283 Pfam ABC transporter 76 232 IPR003439 GO:0005524
Trre3g02860 283 Gene3D - 62 265 IPR027417 -
Trre3g02860 283 SMART AAA_5 85 269 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02860 Trre-Chr3 32158998 32161342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02860 70 250 Calmodulin-binding Proteins AT2G36910 24.194 3.05e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02860 K08711 - gmx:100813417 365.54