Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02846 ATGTTGGTGGAAATTGCAATTGCTTTATTGGTCATTGCTCTTTTGATTCACTTGCGTCCAATACCATCTGCTAAATCAAAGGCACTTCGCCATCTTCCAAATCCTCCAAGTCCCAAACCTCGTCTTCCATTCATTGGTCATCTTCATCTTTTAGATAACCCTCTTCTTCACCATTCTCTAATCCGTTTAAGTGAACTTTATGGCCCTTTGTTCTCTCTTTACTTTGGCTCCATGCCTACCGTTGTTGCCTCCACACCTGATTTGTTCAAACTCTTCCTTCAAACTCACGAAGCTTCTTCGTTTAACACAAGGTTCCAAACCTCGGCTATTAGACGCCTCACTTATGATAACTCGGTTGCTATGGTTCCCTTTGGACCTTATTGGAAGTTCATTAGAAAGCTCATTATGAATGATCTCCTTAACGCAACCACCATCAATAAGTTGAGACCCTTGAGGAGCAAAGAAATCCGCAAGTTTCTTAAGGTTATGGCTCAGAGTGCTGAAACTCAACAGCCACTTAATGTCACTGAGGAGCTTCTTAAGTGGACAAACAACACAATCTCTACCATGATGTTAGGTGAGGCTGAAGAGGTTAGAGATATTGCTCGTGATGTTCTTAAGATCTTTGGGGAATATAGTATTATGGACTTCATTGGGCCTTTGAAGATTTTTAAGAAGTTTGGAAACTATGAGCAGAGAATTGATGCTATTTTTAACAAGTATGATCCTATCATTGAAAAGGTTATCAAGAAAAGACAAGAGATTGTCAACAAAAGAAGAAGTGGTGAAATTCAAGAGGGTGAGGAGGAGAGTGTAGTTTTTCTTGATACTTTGCTTGAATATGCTCAGGATGAAACCATGGAGATCAAAATTACAAAGGAACAAATCAAGGGTCTTGTTGTGGATTTCTTCTCTGCTGGGACAGACTCCACAGCTGTGGCAACAGAATGGACGTTGGCTGAGCTCATCAATAATCCGAGTGTGTTGAAGAAAGCTCGAGAGGAGATAGAATCTGTTGTGGGAAAAGATAGACTTGTTGACGAATCAGATGTTCAGAATCTTGCATACATTAGAGCTATTGTGAAGGAGGCATTTCGATTGCACCCACCACTACCTGTGGTCAAGCGAAAATGTACTCAAGAGTGTGAGATCAATGGTTATGTGATTCCAGAGGGAGCATTGATACTTTTCAATGTATGGCAAGTTGGAAGAGATCCAAAATATTGGGAAAAACCACTAGAATTCCGTCCAGAGAGGTTCTTAGAAAAAGTCGGTGAAGGCGAAGCAGCTTCAATCGATCTTAGGGGTCAACATTTCCAACTTCTACCATTTGGTTCTGGAAGGAGGATGTGCCCCGGAGCCAATTTGGCTACAGCAGGAATGGCCACACTACTTGCATCTATTATCCAATGCTTTGATCTACAAATACCAGGCGCACATGGACAAGTATTGAAAGGTGATGATGCTAAAGTTAGCTTGGAAGAGAGGGCTGGTCTAACTGTTCCAAGAGCACATAATCTCGTATGCGTTCCACTTGCAAGAGCTGGTGTTGCAGCTAAACTCATTTCCTCCTAA 1575 0.4165 MLVEIAIALLVIALLIHLRPIPSAKSKALRHLPNPPSPKPRLPFIGHLHLLDNPLLHHSLIRLSELYGPLFSLYFGSMPTVVASTPDLFKLFLQTHEASSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTINKLRPLRSKEIRKFLKVMAQSAETQQPLNVTEELLKWTNNTISTMMLGEAEEVRDIARDVLKIFGEYSIMDFIGPLKIFKKFGNYEQRIDAIFNKYDPIIEKVIKKRQEIVNKRRSGEIQEGEEESVVFLDTLLEYAQDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWTLAELINNPSVLKKAREEIESVVGKDRLVDESDVQNLAYIRAIVKEAFRLHPPLPVVKRKCTQECEINGYVIPEGALILFNVWQVGRDPKYWEKPLEFRPERFLEKVGEGEAASIDLRGQHFQLLPFGSGRRMCPGANLATAGMATLLASIIQCFDLQIPGAHGQVLKGDDAKVSLEERAGLTVPRAHNLVCVPLARAGVAAKLISS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02846 524 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 SUPERFAMILY Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PANTHER STEROID 21-HYDROXYLASE-RELATED 12 504 - -
Trre3g02846 524 Gene3D Cytochrome P450 24 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02846 524 CDD CYP93 68 511 - -
Trre3g02846 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Trre3g02846 524 Pfam Cytochrome P450 36 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02846 Trre-Chr3 31701227 31702923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02846 1 514 Cytochrome P450 AT5G06900 35.810 1.71e-107 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02846 K23179 - ag:BAA76380 845.884