Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02841 ATGAAATTCATAGATTTTTTCTTTGCAAAGAAACCACTTTTTCCAATATTAATAGCTATTGTTTTAGCTGCTTTTGTTATCAAAATTCATGGCAATAGATTATTTGACAAGAAAAGAAAATATCACCCTGTTGCTGGCACAATTTTGCATCAACTGTTAAACTTTCATAGGCTGCTAGAGTACATGACTGACCTTACAAATAAGAGAAAAACTTACAGGTTGCTAAGCTTCACTAGAAGTGAAGTGTATACTTCAAACCCTGCTAATATTGAACATATTCTAGTGACAAACTTCTCAAACTATGGCAAGGGTTGGTATCACCACAGTGTCTTGGAAGATCAGAGAAAATCAGCAAGCTATCAATTCTCGACTAAGTTATTGAAAGAATTTAGCAGCTCAGTGTTCAAATCTAATGCAGTAAAACTTGCAGGGATAGTGTCTGAAGCTGCATTCTCAAACAATATTATTGAACTGCAGGGCCTGTTCATGAAATCAACTCTAGAATCTGCATTCAAGGTTATTCTTGGTGTAGAATTGGACACAATGTGTGGAACCTATAGAGAAGATACACAATTTTCCATTGCTTTTGATGAAGCAAGTGCAGCTATCATGTTTCGGTATGTTAACTTTCTCTGGAAAGTTCAGCGGTTCTTGAACATTGGATCAGCAGTACTCAAGAAAAGCCTAAAAGTGATCGACGAATACGTGTACAAAGTAATCACAAGCAAGATTGAGCAATCTCAAAACAACCATAATAACTCTCTTGAGTTGAAAGGAGACATTTTGTCAAGGTTTCTAGAATTGAATGAGACAGATCCAAAGTACCTTAAAGACATTATTTTGAGTTTTATCATTGCAGGGAAAGATACATCAGCAATCACTCTTTCCTGGTTTATTTACCAACTCTGCAAGCATCCTCATGTGCAAGAAAAGATTGCAAACGAGATCAGGGAGGTTTCAAAATTAGAAGATGGTTTAACCATTGATGAACTTGCAGCTAAAGTAACTGAAGAAAACATGGAAAAGATGCAGTATCTGCATGCAGCTTTGACTGAAACTATCAGGCTCCATCCAGCACTTCCAGTGGAAAGCAAGTATTGTTTTTCGGATGACACATTGCCAGATGGATATAGTGTGAGGAAAGGTGATCTTATTTCATTCCAACCATATGTCATGGGAAGGATGAAATTCTTGTGGGGTGAAGATGCTGAGCATTTCAGGCCAGAGAGATGGCTTGATCAAAATGGAAATTTTAAGAAAGAAAGCCCTTTTAAGTTCACAGCCTTCCAGATATGGACCATTTTCAACATTTAA 1314 0.3683 MKFIDFFFAKKPLFPILIAIVLAAFVIKIHGNRLFDKKRKYHPVAGTILHQLLNFHRLLEYMTDLTNKRKTYRLLSFTRSEVYTSNPANIEHILVTNFSNYGKGWYHHSVLEDQRKSASYQFSTKLLKEFSSSVFKSNAVKLAGIVSEAAFSNNIIELQGLFMKSTLESAFKVILGVELDTMCGTYREDTQFSIAFDEASAAIMFRYVNFLWKVQRFLNIGSAVLKKSLKVIDEYVYKVITSKIEQSQNNHNNSLELKGDILSRFLELNETDPKYLKDIILSFIIAGKDTSAITLSWFIYQLCKHPHVQEKIANEIREVSKLEDGLTIDELAAKVTEENMEKMQYLHAALTETIRLHPALPVESKYCFSDDTLPDGYSVRKGDLISFQPYVMGRMKFLWGEDAEHFRPERWLDQNGNFKKESPFKFTAFQIWTIFNI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02841 437 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02841 437 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02841 437 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02841 437 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02841 437 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02841 437 SUPERFAMILY Cytochrome P450 40 430 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02841 437 PANTHER CYTOCHROME P450 27 430 - -
Trre3g02841 437 Pfam Cytochrome P450 42 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02841 437 Gene3D Cytochrome P450 38 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02841 Trre-Chr3 31635839 31637511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02841 33 430 Cytochrome P450 AT2G45510 45.412 2.10e-121 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02841 - - pvu:PHAVU_007G063800g 624.394