Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02840 ATGAAATTCATAGATTTTCCCTTTGCAGTGACAACTCTTTTTACAACATCAATTGCCATTGTTTTAGCTGCTTTTGTTATCAAAATTCATGGCAATAGATTGTTTGACAAGAAAAGAAAATATCACCCTGTTGCTGGCACAGTCTTGCATCAAATGTTCAACTTTCATAGGCTGCTAGAGTACATGACTGACCTTACAAATAAGAGAAAAACTTACAGGTTGCTTAGCTTCACAAGAAGTGAAGTGTACACTTCAAATCCTGCTAATATTGAGCATATTCTACTGACAAATTTCTCAAACTATGGCAAGGGTTGGTATCACCACGGGGTCTTGGAAGATCTACTGGGAGATGGTATATTCACAGTGGATGGAGAGCAGTGGCGACATCAGAGAAAATCAGCAAGCTATCAATTCTCAACTAAGTTATTGAGGGAATTTAGCAGCTCAGTGTTCAAATCCAGTTTAGTAAAACTTGCAGGGATAGTGTCTGAAGCTGCAATCTCAAACAATATCATTGAACTGCAGGACCTGTTCATGAAATCAACTCTAGATTCTGTATTCAAGATTATTCTTGGTGTAGAATTGGACACAATGTGGGGAACCTATAGAGAAGGCGCAGAATTTTCCATTGCTTATAATGCAGCAAGTGAAGCTATCATGTTTCGGTATGTTAACTTTTTCTGGAAAGTTCAGCGGTTCTTGAACATTGGATCGGAAGCAGTTGTAACACCCCGTTTTTCGAAAACCAAAAAGGGCATTATTTTTTTTTCTTTTTCTTTTTCAACTAACACTCAGAGTGCGCATAGAATATTTTCCAATGAGCCGGCATTCAAATATACAAAAGACTCATTACCAAAAGAGCTCGCCCTGGCGAGTTGGTGGCGAGTGAAGGCAGAGAGTTCTGGTCTTACTCGCCCTGGAGCTCGCCCTGGCGAGTTGTCAAGACCTGTGACACTCGCCCTGGCGAGTAACCACTCGCCTGGCGAGTTTCAACTGTCATGA 1002 0.4082 MKFIDFPFAVTTLFTTSIAIVLAAFVIKIHGNRLFDKKRKYHPVAGTVLHQMFNFHRLLEYMTDLTNKRKTYRLLSFTRSEVYTSNPANIEHILLTNFSNYGKGWYHHGVLEDLLGDGIFTVDGEQWRHQRKSASYQFSTKLLREFSSSVFKSSLVKLAGIVSEAAISNNIIELQDLFMKSTLDSVFKIILGVELDTMWGTYREGAEFSIAYNAASEAIMFRYVNFFWKVQRFLNIGSEAVVTPRFSKTKKGIIFFSFSFSTNTQSAHRIFSNEPAFKYTKDSLPKELALASWWRVKAESSGLTRPGARPGELSRPVTLALASNHSPGEFQLS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02840 333 PANTHER CYTOCHROME P450 26 242 - -
Trre3g02840 333 SUPERFAMILY Cytochrome P450 40 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02840 333 Gene3D Cytochrome P450 32 256 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g02840 333 Pfam Cytochrome P450 42 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02840 Trre-Chr3 31620618 31623119 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02840 9 253 Cytochrome P450 AT2G45510 43.145 8.38e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02840 - - pvu:PHAVU_007G063800g 355.91