Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02821 ATGGTGATACAAGTTATGGTTCATAAAGATATTAAAGCAAGTAATGCATTATTAGATTCTGAATTAAATGGTAGCTTAGGTGATTTTGGTCTTTCAAGATTATATGATCATGGAACTGATCCTCAAACAACACATGTTGTTGGAACACTTGGTTATTTAGCACCAGAACATACAAGAACAGGTAAAGCTACAACAAGTTCTGATGGTATTCTCTTGGTGCTTTTTTACTTGAAGTTGTTTGTGGTAAAAGGCCTATTGAACAAATTAGAGAATGTGAGAGTGAAATTGTTTGAAGAAGTTGAATTGGTTTTGAAACTTGGTTTGCTGTGTTCACATTGTGAGGCATTGACAAGACCAAGTATGAGACAAGTTTTGAGGGTTTTGGAGAGGGATTTGCCACTTCCTGATTTATGTTTTCTTAGTTTGGATTCAATGAGATTAACTTCTGGACAGTCTAAGAATTTTCAGGGTTTTGTTATGTCTTATCCGTCTTCTTCTATGGATAGACCATTCTTTCATACTTCAATTGTTGAATCACTTCTTTCCTCGGTGGTAAATGAGTTTTTAGAAGAGATGTGA 579 0.3472 MVIQVMVHKDIKASNALLDSELNGSLGDFGLSRLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDGILLVLFYLKLFVVKGLLNKLENVRVKLFEEVELVLKLGLLCSHCEALTRPSMRQVLRVLERDLPLPDLCFLSLDSMRLTSGQSKNFQGFVMSYPSSSMDRPFFHTSIVESLLSSVVNEFLEEM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02821 192 Pfam Protein kinase domain 6 68 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02821 192 ProSiteProfiles Protein kinase domain profile. 1 192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02821 192 Gene3D Transferase(Phosphotransferase) domain 1 4 138 - -
Trre3g02821 192 SUPERFAMILY Protein kinase-like (PK-like) 6 145 IPR011009 -
Trre3g02821 192 PANTHER - 4 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02821 Trre-Chr3 31220335 31220913 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02821 4 183 Receptor kinase-like Gene Family AT2G37710 48.077 2.00e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre3g02821 Pkinase 3.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02821 - - vvi:100854743 179.489