Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02804 ATGGAGCTTTCCAAGTTTGAAGTTGTGAGCTTCAAGTCCATGGGAGAGAATCCTCATGCATGCACTATGCAGCTTTCCAAGTTTGAAGTTGTGAGGTTGGTGAGATCATTAGAATGCCAAAATTTTACTAGAATAAGCGGAAGGATTTTACAATTAGAGACAGAAACTCAATCTAAGGCTATGAGAAGGCGGTATCAATTTTTAAGCCATTTTCCGCTAACAACAATATTTCAGCTTTGTGAAGTTGTTTTGAGCGAGATCTTACCTCCTGAAGCACTAGCCCCTTTTGTGAGGTTTTATCACAAAATTGGTTACTAG 318 0.3899 MELSKFEVVSFKSMGENPHACTMQLSKFEVVRLVRSLECQNFTRISGRILQLETETQSKAMRRRYQFLSHFPLTTIFQLCEVVLSEILPPEALAPFVRFYHKIGY 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02804 105 PANTHER RING FINGER 10 FAMILY MEMBER 44 97 IPR039739 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02804 Trre-Chr3 30559933 30561060 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02804 44 97 C3H Transcription Factor Family AT3G26730 61.111 8.98e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02804 K26979 - gmx:100798764 93.9745