Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02762 ATGGAGTATGATGGTGATCTATTTGCAGTAGTAAAACCCTACATCACCTTTTCCACCACCACAACCACCACAATAGCCACCTCATCAACACATTCTTCCTCCGGTTTTGAAACTTTAGCATCTTCCAACTTCTCTCTTTACCCCGTAGAACAATCACGTCAAATTTTGTCTCTTTTAAACCCTTTAGACGTAAAAAGTTCTATTGAATGTAACAATGACTCTCACAATGCTGTCTCTGCTACAGCCTCAAATTCTATAAAAAGGAAGAATAAGGTATGTGAAAAGAAAGCTAAAAATCTCACATTAGATTTATGGAAATGGAAAAAATATGGCCAAAAACCTATCAAAGGGTCACCATATCCAAGGGGATATTATAAATGCAACAATTCAAAATGTTTAGCCAAAAAACAAGTTGACCAGATCAAATCAAATCCAACAACGTTCACAGTTACATATTTTGGTGAACATAATCACAAGCCATTGTCACCTAAAATTGTCGCTATTGAAGACTTTTCTCAACTCTTTGAAAAACATATTCCTGAAAAGCAATATATTCCTCAACAACTTAATAATAATATTAATGAGGTGGTGAATTTCATTAATGTTGATGTGCCTCATGTTTCATCAACAAACCAAGTTGATGAATTCGTTGTGTTGGAAAATTTTCTAATGGCTACACCTGAGCAAGAATCGGATCTTCAAATTGATAAAGTACTTTTAGAGTTGAATAACCATATCGATGAACCTGAGGACCGTGTTACTAAACTCGATGTGCCACATGTTTCGTCAACAAACCAACTTGGTGAAATTTTGGAGTTGGATAATCTAGTGGCCGAGGCCGCCAAGCTTAAGGACTGGGATACTGAAGTTGTAGATTTTGATGATAATGTCAATTGGGTTAGTCAACCTGACGTGTTTGCGAAGCAAGGCCTTTCTTTTTTGTCTAAGAATCAACATCATTGA 963 0.3614 MEYDGDLFAVVKPYITFSTTTTTTIATSSTHSSSGFETLASSNFSLYPVEQSRQILSLLNPLDVKSSIECNNDSHNAVSATASNSIKRKNKVCEKKAKNLTLDLWKWKKYGQKPIKGSPYPRGYYKCNNSKCLAKKQVDQIKSNPTTFTVTYFGEHNHKPLSPKIVAIEDFSQLFEKHIPEKQYIPQQLNNNINEVVNFINVDVPHVSSTNQVDEFVVLENFLMATPEQESDLQIDKVLLELNNHIDEPEDRVTKLDVPHVSSTNQLGEILELDNLVAEAAKLKDWDTEVVDFDDNVNWVSQPDVFAKQGLSFLSKNQHH 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02762 320 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 31 168 IPR044810 GO:0003700
Trre3g02762 320 ProSiteProfiles WRKY domain profile. 96 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g02762 320 Pfam WRKY DNA -binding domain 103 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g02762 320 SUPERFAMILY WRKY DNA-binding domain 100 160 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre3g02762 320 SMART WRKY_cls 101 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g02762 320 Gene3D WRKY domain 86 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02762 Trre-Chr3 29741346 29743963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02762 1 158 WRKY Transcription Factor Family AT4G01250 38.830 9.21e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre3g02762 WRKY 5.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02762 K13425 - gmx:100815829 128.257