Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02748 ATGAGGGTAACTCACATAATAGAGTCATCTAGATTTGTAACATTCTTTATTTTGTTCTTCTTTTTCTTCATTCATTTAACATCTTGTGATTCAGATTCAATAAACATTCTTTCAGACAAAATTCTCCTTAACTGTGGTTCATCTGAATCATCACCATTCAATGGTGTCAATTGGATAGGAGATATTGGAACAACTTTCTTGCCTCCATCATATGAAACAACTTCATCAACAACACTCTTAATCTCAAACATAAACAAAGTAGCACCAAAAATTCCTTACTCAACAGCAAGAATAATTCCTCATTCTTCATTCACCTACTCTTTTCCTTTCTCTTCTTCTGGTCTTAAATTCATTCGTTTATATTTTCTCTCAACTACATATTTACCAATATACCCTTCCAACTCAAATTCATACTTTTCTGTCAAATCTGGTGCATACACTCTTGTTAACAATTTCAATCCATTACTTGCTGCACAAGAATTCAACTCACCTTATATCACCAAAGATTTCTTTGTCAACATCAAAGAAAAGAAACTCAACATTACTTTTACTCCATCTCCTCAAATTCCCAAAGCTTTTGCTTTTATAAATGGAATTGAAACATTCTCTGTACCCAACAATTTATTCTCTCATCATGCTTCAAATTCTAATGTTTCTGTTCCTTATCTTGGACAAAAAGAACGGTTTTTTATCAACAATGAATATGCTTTTGAGAAGCTTTACATGGTTCGCATGGGTAATGGAGTTAACCCTCTTGTTAAAAATGAATTTGGGTCATGGCAAGATGATAAAAACTACATTTCTGGTTCACAATATGGAACTGTTCTTGTCTTGAGAGATGCTAGAGTTAATATGAATGATAGTTTTCTCAATTCAAATGACTTTAACTATTCAGCACCAGAAAATTTATATTGGTCTGCAAGAACAATGAGTAGTAGCAGTGAAAATTTAACATGGTCATTTTCAGTTGATTCTGGATTCAAGTATCTTGTTAGGCTTCATTTCTGTGAGATATCTATGTTGGTAACAGATATTAATCAGAGGGTTTTTAGTGTTTATATAAACAACCAAACAGCCGAGGAAAAATTAGATTTAGTTGCTTTGGTTGGTGAACCTTTAAGTCCTTTGTATAGAGATTATGTTGTAAGGGTTCCTTTTGAGACTGAGAGAAGGAAAGTTTTCATGTTGATCTCACTTCATCCCAATTTGGAGTCAAAACCAAAGTATGCTGATGCTATATTGAATGGAGTTGAAATTAGTAAGTTAAGTGATAGTAATTATAATCTTGCTTCAAGTTTTCAATTGAAGAATGAAGAACTTCACAAGAAGAAGAAGAAATTTCCAATTTTTATTGTTGTGGGGGCTAGTACTTTAGGTTCCATTTTGGGACTTTTCATAACATTTTTCATTCTTAGAAGAAAAGAATGGAGAAATATAAAAATTGGAACTTTTCAGGTTCTTACATTGAATTCTACTGCCACAAGTGAAGAAAAGGTGATATCAGGTAATTGCTATCAATTCACTTTAGCAGAGATTATATCAGCAACAAGTAACTTCAATGAAGATCTTTTGATTGGAGAAGGAGGTTTTGGAAAGGTATACAAAGGAATCATCATGCTTGATGGAGTGACTGATCATGTGGCAATAAAGCGCGCTAAGCCCAGTTCGCGTCAAGGATTTAAGGAATTTCAAAATGAGATCAACTTTCATTCATTTTATCACATGAATTTAGTTTCATTGTTGGGATACTGCCAAGAGAGCAATGAACTGATACTTGTGTATGAATACATGACTAAAGGTCCACTTTGTGATCATTTGAACAAGAAACAGAAGCAGCCACTTTCTTGGAATCAAAGACTAGACATTTGTATTGGTGCAGCTAGGGGAATCCATTACCTTCATACAGGCAGAAATAATCCAGTGATTCACCGTGACATCAAGTCGTCGAACATATTATTGGATCAGAATTTGATTCCAAAGATTGCAGATTTTGGGTTGTCTAGAATGGTTGATTCCATTTACCACACTCATGTTAGTACTGAGGTTAAAGGTACTTTTGGATATTTAGATCCTGAGTACTATAAGAGAAGAAAATTGAGTGAAAAAAGTGATGTTTATTCATTTGGAGTAGTTTTGTTTGAAGTGTTGACTGGAAGAGGAGCAGTGAATCCTATGGCAATGGAAGAGGAAAATGAGAAAGTTGGTTTGGTAGAATGGGCTATGCATTGTTACCAATCTGGGACTATTGATAGATTGGTTTGTTCTTCTTTAGAAGGAAAAATAAGTTTGGAGTGCTTAAAAGACTTTGTGGAAATTGGCATTCAGTGCTTGGCTAACAAAAGTGCAGAAAGGCCAACTATGGGAGAGGTGCTGAGTAGTTTGGAGAAAATTCTCTCCTTGCAGAAAAGTTTGGAGGGGCAGGAAATCAATGCAGTCAATATATCCACGTAG 2451 0.3443 MRVTHIIESSRFVTFFILFFFFFIHLTSCDSDSINILSDKILLNCGSSESSPFNGVNWIGDIGTTFLPPSYETTSSTTLLISNINKVAPKIPYSTARIIPHSSFTYSFPFSSSGLKFIRLYFLSTTYLPIYPSNSNSYFSVKSGAYTLVNNFNPLLAAQEFNSPYITKDFFVNIKEKKLNITFTPSPQIPKAFAFINGIETFSVPNNLFSHHASNSNVSVPYLGQKERFFINNEYAFEKLYMVRMGNGVNPLVKNEFGSWQDDKNYISGSQYGTVLVLRDARVNMNDSFLNSNDFNYSAPENLYWSARTMSSSSENLTWSFSVDSGFKYLVRLHFCEISMLVTDINQRVFSVYINNQTAEEKLDLVALVGEPLSPLYRDYVVRVPFETERRKVFMLISLHPNLESKPKYADAILNGVEISKLSDSNYNLASSFQLKNEELHKKKKKFPIFIVVGASTLGSILGLFITFFILRRKEWRNIKIGTFQVLTLNSTATSEEKVISGNCYQFTLAEIISATSNFNEDLLIGEGGFGKVYKGIIMLDGVTDHVAIKRAKPSSRQGFKEFQNEINFHSFYHMNLVSLLGYCQESNELILVYEYMTKGPLCDHLNKKQKQPLSWNQRLDICIGAARGIHYLHTGRNNPVIHRDIKSSNILLDQNLIPKIADFGLSRMVDSIYHTHVSTEVKGTFGYLDPEYYKRRKLSEKSDVYSFGVVLFEVLTGRGAVNPMAMEEENEKVGLVEWAMHCYQSGTIDRLVCSSLEGKISLECLKDFVEIGIQCLANKSAERPTMGEVLSSLEKILSLQKSLEGQEINAVNIST 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02748 816 ProSiteProfiles Protein kinase domain profile. 519 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02748 816 SMART serkin_6 519 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02748 816 Gene3D Phosphorylase Kinase; domain 1 480 596 - -
Trre3g02748 816 Pfam Protein tyrosine and serine/threonine kinase 524 794 IPR001245 GO:0004672|GO:0006468
Trre3g02748 816 FunFam receptor-like protein kinase FERONIA 484 596 - -
Trre3g02748 816 CDD STKc_IRAK 525 797 - -
Trre3g02748 816 Gene3D Transferase(Phosphotransferase) domain 1 597 814 - -
Trre3g02748 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Trre3g02748 816 FunFam FERONIA receptor-like kinase 40 205 - -
Trre3g02748 816 Gene3D - 238 421 - -
Trre3g02748 816 Gene3D - 41 204 - -
Trre3g02748 816 FunFam FERONIA receptor-like kinase 235 423 - -
Trre3g02748 816 Pfam Malectin-like domain 43 421 IPR024788 -
Trre3g02748 816 SUPERFAMILY Protein kinase-like (PK-like) 492 794 IPR011009 -
Trre3g02748 816 FunFam Receptor-like protein kinase FERONIA 597 815 - -
Trre3g02748 816 PANTHER OS07G0166700 PROTEIN 503 801 IPR045272 GO:0004714|GO:0006468
Trre3g02748 816 ProSitePatterns Protein kinases ATP-binding region signature. 525 550 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02748 Trre-Chr3 29509590 29512040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02748 38 805 Receptor kinase-like Gene Family AT3G51550 42.327 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre3g02748 Malectin_like 3.7e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02748 - - tpra:123911550 1402.88