Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02743 ATGGAGAAATATAAAAATTGGAACTATTCAGGCATAAGTGAAGAAAAGGTTCAAGCAATGGTATTGGTGCAGCCACTTTCTTATAATCAAAGACTAGAGATTTGTATTGGTGCAGCTAGGGGAATCCATTACCTTCATACAGGAAGAAATAATCCGGTGATTCCCCGTGACATCAAGTCGTCAAACATATTATTGGATCAGAATTTGGTTCCAAAGATTGCAGATTGTGGATTGTCTAGAATGGTTGATTCCATTTACCACACTCATGTTAGTACCGAGGTTAAAGGTACTTTTGGATATTTAGATCCTGAGTACTATAAGAGAAGAAAATTGAGTGAAATAAGTGATGTTTATTCATTTGGAGTGGTTTCGTTTGAAGTGTTGAGTGGAAGATGTAACGGCCTGGACCCCACCTACTTAGGTGGTCCCGCAACTGCCACCTCACAATATTCTCCACCTCCTATTTAG 468 0.391 MEKYKNWNYSGISEEKVQAMVLVQPLSYNQRLEICIGAARGIHYLHTGRNNPVIPRDIKSSNILLDQNLVPKIADCGLSRMVDSIYHTHVSTEVKGTFGYLDPEYYKRRKLSEISDVYSFGVVSFEVLSGRCNGLDPTYLGGPATATSQYSPPPI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02743 155 PANTHER OS07G0166700 PROTEIN 24 132 IPR045272 GO:0004714|GO:0006468
Trre3g02743 155 Pfam Protein tyrosine and serine/threonine kinase 24 129 IPR001245 GO:0004672|GO:0006468
Trre3g02743 155 ProSiteProfiles Protein kinase domain profile. 1 155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g02743 155 Gene3D Transferase(Phosphotransferase) domain 1 14 145 - -
Trre3g02743 155 SUPERFAMILY Protein kinase-like (PK-like) 21 133 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02743 Trre-Chr3 29496185 29496652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02743 26 138 Receptor kinase-like Gene Family AT5G59700 67.257 6.84e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre3g02743 PK_Tyr_Ser-Thr 4.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02743 - - tpra:123911550 206.453