Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02737 ATGTCGGGGCAATCACAGCGTTTGAATGTGGTCCCCACAGTGACAATGCTTGGTGTTGTGAAAGCACGTTTGGTTGGTGCAACAAGAGGCCATGCACTTCTGAAGAAGAAAAGTGATGCCTTAACTGTTCAGTTTCGTCAGATCCTGAAAAAGATTGTTTCAACAAAGGAATCAATGGGTGATATCATGAAAACATCTTCATTTGCATTAACCGAGGCTAAGTATGTAGCTGGTGATAATATCAAGCATGTCGTGCTTGAGAATGTTAAGGAAGCTTCACTCAGGGTGCGTTCTCGTACTGAGAATGTAGCTGGAGTGAAACTTCCAAAATTTGAGTACTCTGCTGACAGTGAGGCCTCGAAGAATGACCTTACCGGGTTGGCTAGAGGTGGTCAGCAGGTGCAGCAGTGTCGTGTTGCTTATATTAAGGCAATTGAGGTTCTTGTTGAGCTTGCTTCGCTGCAGACCTCTTTCCTTACCCTTGATGATGCTATTAAGACTACTAACCGTAGGGTTAATGCTCTTGAGAATGTTGTTAAGCCACGGTTGGAGAATACTATTAGTTACATTAAGGGTGAGTTGGATGAACTCGAGAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGTTATAAGAGGAGGGAAATTGAAAGGAAGATGGTGCTTGCTAGGGAACAACAGGCTGTTGAAAAGTTACAATTGCTGAAAGGGGTTTCGTATGAGTCCTCAAACTTGTTGGCTGGTACAACTGGGTGA 756 0.4365 MSGQSQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRTENVAGVKLPKFEYSADSEASKNDLTGLARGGQQVQQCRVAYIKAIEVLVELASLQTSFLTLDDAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKRREIERKMVLAREQQAVEKLQLLKGVSYESSNLLAGTTG 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02737 251 Gene3D - 1 199 - -
Trre3g02737 251 NCBIfam V-type ATP synthase subunit D 9 212 IPR002699 GO:0046961
Trre3g02737 251 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 235 IPR002699 GO:0046961
Trre3g02737 251 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Trre3g02737 251 Coils Coil 180 200 - -
Trre3g02737 251 FunFam V-type proton ATPase subunit D 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02737 Trre-Chr3 29088563 29089432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02737 1 248 Primary Pumps ATPases(2) AT3G58730 78.571 5.64e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02737 K02149 - gmx:100801612 418.698