Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02694 ATGGAAAAAGTTGCAAAACTAACAAAGCTTAAGTCAGTGCTCAAGAAATGGAACACCTTCACCTATTACAACAACAATAAACACAACCGCTCCAACATCAGAGCGGTTGCAAACGAAGATGTTGACTCATGTGCGTTGTCGGAACAAGATCTTCGCCCGGTGTTTGTTGGAAAGACGCGAAGGCGTTACCTTGTTAATTCAGCTGTTGTTGGACATCCGCTTTTCCGGGAGCTTGTGGATAGGTCTCGCGACTCGACCGAGGTAAACAACGAGGACGACGATGAGGTTAATGTGGCTTGTGAGGTTGTTCTATTCGAGCATATGTTGTGGATGCTCGAAAATTCCGATCCTCAACCAGAATCGTTGGATGAACTTGTTGATTATTACAGTTGCTAG 396 0.4495 MEKVAKLTKLKSVLKKWNTFTYYNNNKHNRSNIRAVANEDVDSCALSEQDLRPVFVGKTRRRYLVNSAVVGHPLFRELVDRSRDSTEVNNEDDDEVNVACEVVLFEHMLWMLENSDPQPESLDELVDYYSC 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02694 131 PANTHER EXPRESSED PROTEIN 29 130 - -
Trre3g02694 131 Pfam Auxin responsive protein 10 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02694 Trre-Chr3 28538293 28538688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02694 1 114 Calmodulin-binding Proteins AT3G43120 23.188 1.49e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02694 - - mtr:25486572 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02694 3 28538293 28538688 Trre3g02694 3 28538293 28538688 ECH