Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02671 ATGCAAACCCTTCTCAAACTCACTACTCTCTTACTCTTCTTCTTCACTTTCTCAGCCTCCATCTCGGCCCATGATGAAGCCCAAGCCCAAGATCTAGTCCGTTTCTCCTGCATTCACTCCAGGTACCCAAAGTTATGTCTCCGAACACTCTCCAACTACACCGGGCCAGCTAAAAGCCCATTAGACATAGCCCAGGCAGCACTCCGGGTAAGCTTAGCCCACGCCAAAAGAGCCTCCAAATATCTACTGTCTTCCAAAGGTGGGTCCCACAGCAGCAGCTTAAGTAGAAGGCAGCAGGCTGATCTAAGTGACTGCAAAGAGCAGATAGCTGATTCAATTGATGAACTTCGTAAAAGTTTAGAGGAGTTGCGACATCTGCGACCGGAAACATTCCGGTGGCAGATGAGCAACGCCTTGACTTGGGTAAGTGCCGCACTTACTGACGGCGACACTTGCCTTGATGGGAATGTGAGGCCTGATGTTAAAAAGAGAGTTACTGATCTTGCTAGGGTAACTAGTAATGCTCTTTACATGATCAATCGTGTTGGAAATGGGAAGTTCAAGGGTCGTTCAGGATCTAAAAACTGA 588 0.4796 MQTLLKLTTLLLFFFTFSASISAHDEAQAQDLVRFSCIHSRYPKLCLRTLSNYTGPAKSPLDIAQAALRVSLAHAKRASKYLLSSKGGSHSSSLSRRQQADLSDCKEQIADSIDELRKSLEELRHLRPETFRWQMSNALTWVSAALTDGDTCLDGNVRPDVKKRVTDLARVTSNALYMINRVGNGKFKGRSGSKN 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02671 195 FunFam Pectinesterase inhibitor 3 28 183 - -
Trre3g02671 195 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 182 IPR035513 -
Trre3g02671 195 Coils Coil 106 126 - -
Trre3g02671 195 CDD PMEI-like_3 36 181 - -
Trre3g02671 195 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 182 IPR035513 -
Trre3g02671 195 SMART PMEI_2 28 178 IPR006501 GO:0004857
Trre3g02671 195 NCBIfam pectinesterase inhibitor domain 3 180 IPR006501 GO:0004857
Trre3g02671 195 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 177 - -
Trre3g02671 195 Pfam Plant invertase/pectin methylesterase inhibitor 32 177 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02671 Trre-Chr3 27943357 27943944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02671 32 179 Carbohydrate Esterase AT3G14310 31.481 1.74e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02671 - - mtr:25486551 249.21