Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02633 ATGGCAAAGAAACGTCAACCAACCACCACCACCGCCGCTGCCAAAGATGACCAACCACTCACCCCCGCCTCGAAGAGCAACAAACCGCCACCACCGTCCAAAAAGCCAGAAGAATCAGTCGAAGAAATAGACGACGAAGAAGAGGTAATATCGGTAAATACTTCATCATCTGAAGGTGAAGAAGAAGAAGACGATGATGATGCAGAAGACGATGAAGAAGAAGAAGAACAAACACCTTCTTCCAAAATCATTCAACATGCAAAATCGAAAAAAGATGAAGATAATGACGAAGAAGAAACCGATACTGATTCCGATGATGAAACTGATGATGAAACTGTTCCACCTCCTAAACTCAAATCCATCAATTCAAAATCCAATGATGAAACCCTAAAATCAAAGTCTAAACCAAAATCCTCTGCTTCAACGGGCAGATCTGGAACCAAACGTTCCGCCGATGACGACACCAAACAATCAAAGAAGAAGAAAACAGTTGCTGCTGCTGATGATGAGAAAGAGAAGGAGGTGGAAAACAAAAAGTCCGGTGATGATTCGAAAAAATTGTTTCAGAGAGTTTTCACCGAAGAAGATGAACTCACAATTCTCAAAGGTCTGGTCGATTTTAAAGAAGAAAAAGGGACTGATCCGCTCAAAAATCCTACAGCTTTTTATGAGGAAGTGAAAAAGTCGATTTCATTTCCGGTTACACTCGATCAACTGAAAGATAAGATGCGGAGGCTGAAAACTAAATTTGAGAATAAAATGAAAATTTGTAAAAATGGAAAGACTCCTACTTTTTCCAAACCTGTCGAGGAGGAAATGTTTGAATTTAGCAAAAAGATATGGGGTGGTACCGATGAAAATGGAAAGCCTAATGAGAAACAAGTTGCTGCTAAGAAACCACCAACAACAAAGAAATTGGTGATGGAACCTGATTTTCAGGTTGGAAGTACTAGTGATGGAAAGGAGAATCCTGGGTCGAGTTTCACTATGACTGAAATGCATCGATTCGACAAGAGTGTATCAGGTGTTTTTGGGGTGAGTATAGGTTTGCTTAAGAGTGAATCGAAGTTAATCGAGGAATCAAAGAGGGTAGAGTTGGAGAGAAGGTGGAAGGAGCTGCGAGTTGCTGAATTGAAGTGTACTGCGATGCGAGCTGAATTGACTGAGGATCATGCTAAATTGATATTGGAGGCGTTGCAGTCATCATCAAGCGACGATTAG 1221 0.4103 MAKKRQPTTTTAAAKDDQPLTPASKSNKPPPPSKKPEESVEEIDDEEEVISVNTSSSEGEEEEDDDDAEDDEEEEEQTPSSKIIQHAKSKKDEDNDEEETDTDSDDETDDETVPPPKLKSINSKSNDETLKSKSKPKSSASTGRSGTKRSADDDTKQSKKKKTVAAADDEKEKEVENKKSGDDSKKLFQRVFTEEDELTILKGLVDFKEEKGTDPLKNPTAFYEEVKKSISFPVTLDQLKDKMRRLKTKFENKMKICKNGKTPTFSKPVEEEMFEFSKKIWGGTDENGKPNEKQVAAKKPPTTKKLVMEPDFQVGSTSDGKENPGSSFTMTEMHRFDKSVSGVFGVSIGLLKSESKLIEESKRVELERRWKELRVAELKCTAMRAELTEDHAKLILEALQSSSSDD 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02633 406 MobiDBLite consensus disorder prediction 1 186 - -
Trre3g02633 406 Pfam Protein of unknown function, DUF573 188 282 IPR007592 GO:0006355
Trre3g02633 406 MobiDBLite consensus disorder prediction 78 95 - -
Trre3g02633 406 MobiDBLite consensus disorder prediction 147 186 - -
Trre3g02633 406 Coils Coil 236 256 - -
Trre3g02633 406 MobiDBLite consensus disorder prediction 281 329 - -
Trre3g02633 406 MobiDBLite consensus disorder prediction 40 77 - -
Trre3g02633 406 MobiDBLite consensus disorder prediction 1 23 - -
Trre3g02633 406 PANTHER BNAANNG10740D PROTEIN-RELATED 54 398 IPR007592 GO:0006355
Trre3g02633 406 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02633 Trre-Chr3 26944459 26945679 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02633 99 398 GeBP Transcription Factor Family AT1G61730 32.075 1.12e-28 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre3g02633 DUF573 1e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02633 - - tpra:123884521 411.379