Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02619 ATGGAGGAAGATTGGGATATATCTGCAGTAGTCAGACCCTACATCACCTCTTCCTCCACAATAGCCACCTCATCAACACCTTCTTCCTATGGTTTTGAAACTTCTACATCTTCCAACTTCTCTCTTTACCCTGCACAACAATCATGTCACATTGGGCATGGAGGACCACAACCTCTCACAATGCTGAATTTTAATACCAAACCTTTCTTCCTCCAACCACAACCTATATCACCATCACCAAACTCATCTCAAATACAATCAAATCAATATCACTTTACTAAGAGTTCTTACAATGTTGTCTCTACAACCCCAAAATTTAAAAGGAGGGAGATTCAGCCTAGGAAGAAATGCGAAGTGCAAGCTCAGAATCTCTCATCAGATTTATGGGCATGGAAGAAATATGGCCAGAAACACATTAAAGGGTCACCATATCCAAGGGGATATTTTAGATGTAGCAGTTCAAGAGACTGTTCAGCCAAAAAACAAGTTGAGCAGAAAAAGTCAGACCCAACAAAGTTCACAATAACATATTTTGGTGAACATAATCACCCAGCTCCAACTCGAACTCGTAAAAATTCTTTTGCTGGTTCGCAAAAGTCATTGTCACCACAAAGAGCTGAAGAGGAAAAAACTACAAACTTAGATGATTTTTTTAAAGGTTTAGGTAAATTGACAGGTTTAGATGATATCCTTAACGATTTAGATGAATCGACAGATTTAAGTAATTGTGGTGATGAGGGGCGGCCCTAG 750 0.392 MEEDWDISAVVRPYITSSSTIATSSTPSSYGFETSTSSNFSLYPAQQSCHIGHGGPQPLTMLNFNTKPFFLQPQPISPSPNSSQIQSNQYHFTKSSYNVVSTTPKFKRREIQPRKKCEVQAQNLSSDLWAWKKYGQKHIKGSPYPRGYFRCSSSRDCSAKKQVEQKKSDPTKFTITYFGEHNHPAPTRTRKNSFAGSQKSLSPQRAEEEKTTNLDDFFKGLGKLTGLDDILNDLDESTDLSNCGDEGRP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02619 249 MobiDBLite consensus disorder prediction 188 202 - -
Trre3g02619 249 SUPERFAMILY WRKY DNA-binding domain 122 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre3g02619 249 ProSiteProfiles WRKY domain profile. 120 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g02619 249 Pfam WRKY DNA -binding domain 127 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g02619 249 Gene3D WRKY domain 114 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre3g02619 249 MobiDBLite consensus disorder prediction 179 213 - -
Trre3g02619 249 SMART WRKY_cls 125 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g02619 249 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 37 207 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02619 Trre-Chr3 26543129 26544588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02619 1 235 WRKY Transcription Factor Family AT4G01250 36.803 8.52e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre3g02619 WRKY 4.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02619 K13425 - gmx:100815829 175.252