Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02559 ATGGGTTCTGTTTCCACATTCTTCTTCTCTTTCCTTCTCATTACCCTCTTTTCACAATGCCAATCCTCACCGTTCAAAAAAACCTACATAGTTCACATGAAAGACCACGATAAGCCTACGGTATACCCAACCCATCATGATTGGTACTCTTCAACTCTCCAATCTCTTTCGATTTCAACAGATTCCGACGATGTCGACTCCGATCCATTTCTCTATTCTTACACAACCGCTTACAACGGTTTCGCTGCATCACTTAACGACGAACAAGCCAAAACACTACTCCAAAACGATGCCGTTTTGGGAATCTACGAAGATACCCTTTACCATCTTCACACTACAAGAACACCACAGTTTCTTGGATTAGAAACTGATACTGGTTTATGGGAAGGTCATAGAACTCAAGAGTTAGATCAAGCGTCACACGATGTTATCATTGGTGTGCTTGATACTGGAGTGTGGCCTGAATCGTTGAGTTTTAACGATGCTGGTTTGCCTCAGATTCCCACGCGCTGGCGTGGCGCGTGTGAGAATGCACCTGATTTTAATGCTTCTGTTTGTAACAGAAAACTCATCGGAGCAAGAAGTTTCTCTAGAGGCTTTCACATGGCTTCTGGTTATGGAAAAGGTGATAAAGAGATTGTTTCTCCTCGTGATAGTGACGGACATGGAACTCATACGGCTAGCACCGCCGCGGGATCTCATGTCGGAAACGCGAGTTTTCTCGGTTATGCTACCGGAACAGCGAGAGGTATGGCTCCTCAAGCGCGTGTTGCGGCTTACAAAGTTTGTTGGACTGACGGTTGTTTTGCTTCGGACATTCTCGCCGGAATGGATCGTGCTATTCAAGACGGTGTCGATGTGCTTTCTCTTTCTCTCGGCGGTGGATCTGCTCCGTATTTTCACGACACAATCGCGATCGGAGCTTTCGCCGCGGTTGAACGAGGAATCTTCGTTTCTTGCTCCGCCGGAAACAGCGGACCGACTAAAGCTTCACTCGCTAATGTCGCGCCGTGGATTATGACGGTTGGAGCCGGAACTCTCGACCGTGATTTTCCAGCTTACGCGACATTAGGTAATAAAAAACGGTTTTCGGGAGTTTCACTTTACAGTGGAAAAGGAATGGGAAATAAACCGGTTAGTTTGGTTTATTTCAAGGGTTCAAATTCAAATCAATCCGCCAGCATTTGTTTAGCCGGTTCACTTAAACCGGATTTGGTTCGTGGAAAAGTAGTTATATGCGATAGAGGAATCAACGCGCGCGTGGAAAAGGGTAAAGTTGTAAAAGAAGCCGGTGGAATTGGAATGATACTCGCGAACACCGTCGCGAGTGGGGAAGAATTAGTAGCGGATAGTCACTTGTTACCGGCTGTGGCGGTAGGAAGAATTGTTGGTGATGAGATCAGAAACTATGTGTCGTCTGATTCAAATCCAACGGCTTTGCTTAGTTTTGGTGGAACTGTTTTGAACGTTAGACCTTCACCTGTTGTGGCAGCTTTTAGTTCAAGAGGGCCTAATATGATAACTAAAGAGATTTTGAAACCTGATGTTATTGGGCCTGGTGTGAATATTTTGGCTGGTTGGTCAGAAGCTATTGGGCCCTCTGGGTTGGTTGAAGATACTCGGAAAACTCAGTTCAATATTATGTCAGGTACTTCAATGTCTTGTCCACACATAAGTGGGTTAGCTGCACTATTAAAAGCAGCTCATCCAACTTGGAGTCCAAGTGCAATTAAATCAGCACTTATGACAACCGCTTATGTACACGACAATTCCAAGTCCCCACTTCGTGATGCTGCTGATCGATCCTTTTCAACTCCATGGGCTCACGGTGCTGGCCATGTCAATCCACAAAAAGCACTTTCTCCTGGCCTTGTTTATGATGCTTCAACAAGAGATTACATTACATTCTTGTGTTCCTTAAACTACAACCCTGAGCAAATCCAACTCATTGTTAAACGACGCGGTGTCAATTGTACCAGGAAGTTCTCTAATCCTGGTCAATTGAATTACCCGTCTTTCTCAATCGTGTTTTCAGGCAAGAGGGTCGTGAGATATACGCGCATCTTGACAAATGTTGGTGAGGCGGGTTCTATCTATAATGTGGTGGCTGATGGGCCATCTACTGTGGACATAACCGTGAAGCCGACTAGGCTCGTGTTTGAGAAAGTAGGAGAAAGAAAAAGGTACACGGTTACCTTTGTTTCTAAGAAAGGCGCTGGTGTAGTTAGGAATGGATTTGGTAGCATTCTATGGAGCAATGCACAACACCAAGTTAGAAGCCCAGTTGCTTTTGCTTGGACAGATTTGTGA 2310 0.4519 MGSVSTFFFSFLLITLFSQCQSSPFKKTYIVHMKDHDKPTVYPTHHDWYSSTLQSLSISTDSDDVDSDPFLYSYTTAYNGFAASLNDEQAKTLLQNDAVLGIYEDTLYHLHTTRTPQFLGLETDTGLWEGHRTQELDQASHDVIIGVLDTGVWPESLSFNDAGLPQIPTRWRGACENAPDFNASVCNRKLIGARSFSRGFHMASGYGKGDKEIVSPRDSDGHGTHTASTAAGSHVGNASFLGYATGTARGMAPQARVAAYKVCWTDGCFASDILAGMDRAIQDGVDVLSLSLGGGSAPYFHDTIAIGAFAAVERGIFVSCSAGNSGPTKASLANVAPWIMTVGAGTLDRDFPAYATLGNKKRFSGVSLYSGKGMGNKPVSLVYFKGSNSNQSASICLAGSLKPDLVRGKVVICDRGINARVEKGKVVKEAGGIGMILANTVASGEELVADSHLLPAVAVGRIVGDEIRNYVSSDSNPTALLSFGGTVLNVRPSPVVAAFSSRGPNMITKEILKPDVIGPGVNILAGWSEAIGPSGLVEDTRKTQFNIMSGTSMSCPHISGLAALLKAAHPTWSPSAIKSALMTTAYVHDNSKSPLRDAADRSFSTPWAHGAGHVNPQKALSPGLVYDASTRDYITFLCSLNYNPEQIQLIVKRRGVNCTRKFSNPGQLNYPSFSIVFSGKRVVRYTRILTNVGEAGSIYNVVADGPSTVDITVKPTRLVFEKVGERKRYTVTFVSKKGAGVVRNGFGSILWSNAQHQVRSPVAFAWTDL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02559 769 Gene3D - 637 766 - -
Trre3g02559 769 Pfam Fibronectin type-III domain 667 763 IPR041469 -
Trre3g02559 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 111 IPR037045 -
Trre3g02559 769 FunFam Subtilisin-like protease SBT1.9 18 111 - -
Trre3g02559 769 Pfam PA domain 395 467 IPR003137 -
Trre3g02559 769 FunFam Subtilisin-like protease SBT1.5 637 767 - -
Trre3g02559 769 ProSiteProfiles Serine proteases, subtilase domain profile. 124 620 - -
Trre3g02559 769 Pfam Peptidase inhibitor I9 28 111 IPR010259 -
Trre3g02559 769 CDD PA_subtilisin_like 354 479 - -
Trre3g02559 769 Gene3D - 348 488 - -
Trre3g02559 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Trre3g02559 769 FunFam Subtilisin-like protease SBT1.5 142 361 - -
Trre3g02559 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 763 IPR045051 -
Trre3g02559 769 SUPERFAMILY Protease propeptides/inhibitors 27 110 - -
Trre3g02559 769 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Trre3g02559 769 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Trre3g02559 769 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Trre3g02559 769 MobiDBLite consensus disorder prediction 211 230 - -
Trre3g02559 769 SUPERFAMILY Subtilisin-like 110 624 IPR036852 GO:0004252|GO:0006508
Trre3g02559 769 CDD Peptidases_S8_3 108 586 IPR034197 -
Trre3g02559 769 Gene3D Peptidase S8/S53 domain 142 633 IPR036852 GO:0004252|GO:0006508
Trre3g02559 769 FunFam subtilisin-like protease SBT1.5 348 488 - -
Trre3g02559 769 Pfam Subtilase family 141 589 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02559 Trre-Chr3 25606089 25609326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02559 11 766 Subtilisin-like Serine Gene Family AT2G05920 67.457 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02559 - - gmx:100797543 1222.61