Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02521 ATGGAGAATCTGGGACTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGCGAGATACCCTTCCAACTTGTCACACGCCTTTGGGATACATATCTTGCCGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCTAGTTTTCTTCTTACGGTGAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTATAATGAAACCATTGGCTTTATATTTCATGATGATGCGAAGAAGCTTGACAGAGCTGCTAAAAACAAATATGTTATTTATGGAGAATCATGTTCATTATTTCCAGAGGAAATGGAATGCTACTTCAGAGATGCGATTTTGTATAAGGTTGAAAAGGACTATTCTGAAGAAGATGAGGAGGTTGCTCAATTTAGAGTTATTTCTATGTGCAATGAGGTTGAAGTTGTTAACAAATTCATCGATGAGTATTTATCGAACGATGAAAACATTGAGCCGAGTTATTCAAACCATCAGGACACCCACAGTACAGTTGTGTTAGGAATCCCAAGTGTTGAATCAACTCTAAGGGAGACAAAGGCTCAATTCAACTCTGCACATGGTAGAAGGCACATGAACTCCCAGATTTTTGTTCACTGTTTATGCTGA 633 0.3902 MENLGLEFLQFAFRWFNCLLIREIPFQLVTRLWDTYLAEGDALPDFLVYIFASFLLTVSIGKQWKEFLDYNETIGFIFHDDAKKLDRAAKNKYVIYGESCSLFPEEMECYFRDAILYKVEKDYSEEDEEVAQFRVISMCNEVEVVNKFIDEYLSNDENIEPSYSNHQDTHSTVVLGIPSVESTLRETKAQFNSAHGRRHMNSQIFVHCLC 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02521 210 Pfam Rab-GTPase-TBC domain 1 55 IPR000195 -
Trre3g02521 210 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 1 58 IPR035969 -
Trre3g02521 210 ProSiteProfiles TBC/rab GAP domain profile. 1 40 IPR000195 -
Trre3g02521 210 Gene3D - 1 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02521 Trre-Chr3 25147909 25151397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02521 58 94 Eukaryotic Initiation Factors Gene Family AT4G18040 81.081 2.52e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02521 K20360 - pop:7491723 119.398