Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02510 ATGAAAATCATGTCACCTATTTCAATTCAAAAACCTGAATTTCATATCTTACTTTTCAACGGATCTCCAACTAATTACAAATGCACAAAAATTACATCTTCATGGAACATGTCTATGGATTCCAAAAATTCATCAACTATGAATAGTAATAGTGATATGAAGAATTTGAAGAAGAAGGATGAATTTTCAGTGAAGCTTTCGATGACGGCGGTTCGGAAATTGGATGAAAATTTGAGCTCAAATGGTCTTCAATTTGACCGGTTACAGCCGTTGGATCCAGAGTTAGTTCGAGAAAATAGGTTTGAGTTTGGTCAGTTTGTAGCTAGAGAAGCTGTGCTTGATGAAGAGTATTGGACAGCAGCCTGGCTAAGGGCAGAAAGTCATTGGGAGAATCGAACATATGAAAGATATATTGATATCTACAAAAGGAAATTCGCTGACCAGGAATTTAATGCGGTAAAAAGGCGGTGCAAGGTGCAAAATGGAGATCCTTGTGCATGCATTATCGCGGTGAGGAAGGAGCAGAAGAATGTAAAGCGCTCGATAATTAAAAGTGTTGTGGGAACACTTGATTTGAATATCCGATATTTGCTGCAAGGAGAGACTTTTCCTGGGGAACGAGTCAAGACTCCTTTTTGTTGCAGCACAAACAGGACACCACTGAGTAGATATGGTTATATTGCAAACTTGTGTGTTGCCAAATCGGCTCGCCGACAAGGAATTGCAAGCAACATGATGTATTTTGCTGTTGAGTGTGCAAAATCTAATGCAGGTGTGAGGCAAGTATATGTACATGTTGACCGAAATAATACGCCTGCACAATTATTGTACCAAAAGATGGGTTTCGAGATGGTTGAAACCGCAAACTCCCGGTTGTTACTAGAAGAAACATACTTGCTACGGTTGCTGACATAA 915 0.3956 MKIMSPISIQKPEFHILLFNGSPTNYKCTKITSSWNMSMDSKNSSTMNSNSDMKNLKKKDEFSVKLSMTAVRKLDENLSSNGLQFDRLQPLDPELVRENRFEFGQFVAREAVLDEEYWTAAWLRAESHWENRTYERYIDIYKRKFADQEFNAVKRRCKVQNGDPCACIIAVRKEQKNVKRSIIKSVVGTLDLNIRYLLQGETFPGERVKTPFCCSTNRTPLSRYGYIANLCVAKSARRQGIASNMMYFAVECAKSNAGVRQVYVHVDRNNTPAQLLYQKMGFEMVETANSRLLLEETYLLRLLT 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02510 304 Gene3D - 118 296 - -
Trre3g02510 304 CDD NAT_SF 212 265 - -
Trre3g02510 304 Pfam Acetyltransferase (GNAT) family 161 282 IPR000182 GO:0016747
Trre3g02510 304 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 302 - -
Trre3g02510 304 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 219 304 IPR000182 GO:0016747
Trre3g02510 304 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 162 287 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02510 Trre-Chr3 24825634 24828350 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre3g02510 Acetyltransf_1 1.2e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02510 - - mtr:25486506 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g02510 3 24825634 24828350 Trre3g02510 3 24825634 24828350 ECH