Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02419 ATGGGCAGAGAAATCGTGAGGCGGGAATCAGCATCAGAGCCTGGCAGACGCAGTAGATTATGGTTTGATGACGACATAGTTCATGTTTTGGAAGAAAAGACGGGCACTGATACAATTGAAGTCATAATCATCAACTTATGCAATGATAAAGAAGTGAAGTGGAATGGAAAAGCCTTCAAGAAGATGAAAAACCTGAAAATTCTTATAGTTAGAAGCGCACGGTTTTCTAGGGGCCCTAAAAAACTACCAAACAGTTTGAGAGTTCTGGACTGGAGTGGATATCCATCAGATTCCTTACCAGCTGATTTTAATCCTAAGAATCTAATGATACTTAGTTTGCCTGAAAGTTGCCTTATATCGTTCAAATCGCTCAAGGTGTTTGAGTCTTTGAACTTTCTGGACTTTGAAGGCTGCAAGTTATTAACCGAGCTACCTAGCTTGTCTGGTCTACCAAATTTGGGGGCACTGTGTCTTGACAATTGCACTAATTTAATTACGATTCATAAGTCAGTCGGTTTTCTTGAAAGACTCGTGTTATTGAGTACTCAAGGATGCAACCAGCTAGAAATTTTGGTGCCCTGCATCAATCTGTCATCTCTAGAGACTCTAGATATGAGGGGTTGCTCGCGTCTCAAGAGCTTCCCTGAAGTTTTGGGAGTAATGGAGAATATAAGAGATGTTAATTTAGACCGTACTTCCATAGATAAGTTGCCATTTTCAGTTGGAAATCTTGTTGGCCTCCAACGATTGTTCTTGAGGGAATGCAAGAACCTAACTCAACTACCGGATAGTATTCGTACATTGCCTAAACTTGAGATAATAATGTTTTATGATTGTAGAGGATTTCAATTGTTTGAGGATAAAGAAAAAGTTGGTTCAAAAGTGTTTCCAAAAACCATGCTTGTTTTTAATGAAGGAAAGGGGACAATGCTTGATGTGTGTTCTCTTAACACATGTGCCAATAATGCCATAGAATTATGCGAACCTAATCAAGAAATCATCGCCAATAATGATTTCGGATTCGTGTTTAAAGGGATTTTTGAAGGGAGAGTAAATTGGTACCAGCAAGGAAACAAGAAACCATCGTTGTGTTTTTGGTTTCGAAAGAAATTCCCTCGGATAATTCTATGTTGTGCCGGAGAACCTCCAATAAATAAAGACAATATGGTATTGGATTTCAAGTTGAGTGTACTCATCAATGGCACTAAGCAATTCAGTTCTTCATGTAACTACATATTTTCTGCAGGAAGGATATCAGACCAAATACTTATGTGTGATTTAGTGTGCAAAGGGGAAAGATCATATTTAGAACATGAATGGAATAAAGTAGAGATTTTATATGAGTTCAAATACCCTATGCCATTAGGCTCTGAAAGGATAATGGCCAACCATGACAAGACCACAACAAGAAATCCAAGTTGGTCCCTCATTTATGTCTGTCAAGATATCAAAGAGGATGTCAAATTTATGTCTGAGCTTATGGAATGCAAAGAGGTTGAGAGAAGAAAGGAAACACTATTGGGTGTTCACTCTATGCTCAAGCATCATGGATTTGATTGGATTGGGTTTTGA 1572 0.3836 MGREIVRRESASEPGRRSRLWFDDDIVHVLEEKTGTDTIEVIIINLCNDKEVKWNGKAFKKMKNLKILIVRSARFSRGPKKLPNSLRVLDWSGYPSDSLPADFNPKNLMILSLPESCLISFKSLKVFESLNFLDFEGCKLLTELPSLSGLPNLGALCLDNCTNLITIHKSVGFLERLVLLSTQGCNQLEILVPCINLSSLETLDMRGCSRLKSFPEVLGVMENIRDVNLDRTSIDKLPFSVGNLVGLQRLFLRECKNLTQLPDSIRTLPKLEIIMFYDCRGFQLFEDKEKVGSKVFPKTMLVFNEGKGTMLDVCSLNTCANNAIELCEPNQEIIANNDFGFVFKGIFEGRVNWYQQGNKKPSLCFWFRKKFPRIILCCAGEPPINKDNMVLDFKLSVLINGTKQFSSSCNYIFSAGRISDQILMCDLVCKGERSYLEHEWNKVEILYEFKYPMPLGSERIMANHDKTTTRNPSWSLIYVCQDIKEDVKFMSELMECKEVERRKETLLGVHSMLKHHGFDWIGF 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02419 523 Gene3D Ribonuclease Inhibitor 195 298 IPR032675 -
Trre3g02419 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 288 IPR044974 GO:0006952
Trre3g02419 523 SUPERFAMILY L domain-like 41 286 - -
Trre3g02419 523 Gene3D Ribonuclease Inhibitor 36 194 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02419 Trre-Chr3 23182797 23184727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02419 2 290 WRKY Transcription Factor Family AT4G12020 37.582 1.14e-46 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02419 - - mtr:11441658 740.339