Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02414 ATGGATGCAGAAGAGATTGCACGTTTAACCGATGCAAAATTAATTGATTGCTACTTGAACCGTATTGATAATCCTGGTAGCATATGGAACTCTGAAAATGTTTTGCTACTTTACCTACCAAACCTTATCATGCAAATATTTCTCGTCGTAGTTGCAACCCGTGTAATGTATGGGATCCTCAGACCCTTAAATCAACCTCATTTTGTTGCTGAGCTTCTTGCTGGTTTTGTGCTAAATATATATATTCCCATAATGGATAACACACCCTTTGGAATGGCACTTAAGCCAAAGGGAATCCTTGGATTTGAGACATTATCACAATTGGGTGTGATCTACTATGTCTTTGTCACTGGCTTAGAGATGAATTTAGAGACATTACTAAGAGCAAGAAAAAAAGCATCAACCATTGCAATTGTTGGCACAATTATTCCAATGATATTAGGATTTGGAATATATTTTTTGGTTGAAAAATCATTCAACAAAAAAAATGGTGAATTCAACAAAATCTCAGCTTATTTATTATGGTCATTAGTAGTTACTATCACAAGTTTTCCAGTGGTAGCTCACATTCTTTCAGATCTCAAGATTCTCTATACAGGACTTGGTAGAGTTGCATTAACATCAGCTACAATTAATGACTTTATCAATTGGGCAATGTTTATATTTTTAATACCATTAATTATAAATGGTAAAAGGGGTATAGTATCAGTAATATTAACCATAGTTTTTAGTAATTTTTGTTACTTTGTAATACGTCCACCACTTAACAAAATATTAGTAGAAAAAACTGAAGAAAATGAGTGGGATTTGTACCAATTATCATATGTGTTAGTTGGTGTTATTGCATGTGCAACTGTGACTGAATTTCTTGGTACACATTCAGTTGTTGGAGCATTGATCTTTGGATTAATTCTTCCACGTGGAAAGTTTACAGAAATGTTGATTGAACAATCAGAGGATATTGGATCAGGGTATTTGGCACCATTGTTTTTTGCAAGTATTGGTATGAGAAGTAGAGTGGTTCCAATTTTACATGAAAATATTTTTTTGGCTATATATATTATGATCTTGTTAATTTGTTCTAAGATTGTGAGTGCTATAGTTGCTACAAGATTCTATGGAATGCCTATTAGAGATGGTATGGCTCTTGGAGTGATTATGAATACTAAAGGCATCTTATCATTGATTATACTAAACATTGGATGGAATAGAAAGGTTGTGAGTGAAGAGGAATTTACAATTATGGTGTTCAGTATATTTTTTATGACAGTTGTAGTGGCTCCAATCATCAATGCAATGTACAAACCAAGAGTGACATATGAGCAAAACAAGTTAAGGACAATAGAGAATTTGAAAGCTGATTCTGAGATTAGAGTTATGGCTTGTGTACACAATGTTCGCCAAGCCAATGGAATGATCCACTTTCTTGAAGCTTGCAATGGCCCAAATGTTTCGCTATTACACGTTTTCGCACTTCAACTTGTTGAACTCAAAGGACGTGCAACTGCGCTTCTTGTTGCGCAAATAGACCAACGGCATCAATCTAGTTCCCTCCATAATGGTCTGCAAATTGGAGACCAATCATCGGATACAAATAATTACACATCCAACCATATCGCCAATGTTTTTGAAGAATACTCATCTAACAATGCCAACACGCTTGTGGAAAGTCTTGTTGCTATGTCGTCTTTCTCAACGATTCATAGAGACATATACAATTTAGCATTGGAGAAACAAGCGTCGTTGGTTTTACTTCCATTTCACAAACAGAACACTGCCGAAGGTGCTCTTGAGGTAGCTGATCCCGGGTTCAGAGACATAAACCAAAATGTGATGCAAGATGCGCCTTGTTCGGTTGGAATATTTGTTGACCGAGGTCATCACACATCGTTGTTCAAGACCAAAATGCGTATTCTTATGATTTTCATTGGTGGACCGGACGATAGGGAAGCCTTAGCAATTGCTTGGAGAATGTCGAAGCATCCGTGGACAAGGCTTACCATGGTGAGGATTCTTTTGTGTGGTAAGGCCGCCGAGGTTGAATCAAAGGGGTATAGTGAAGGAGAAGGACTATTATCTACCGTTTTAGATACCGAAAAACAAAAAGAGTGGGATGAAGAGTATGTAAACTCGTTTCGACTAAAGGCAGTGAACAATGAAGATACTATAACGTACGCTGAAAGAGAAGTGCATACCGATGAAGATATTTCGGAAGTGCTTAATGAATTGGACAAAGGAGGTTTTGATTTACATATTTTAGGTCATGGAAGAGGAAGAAACTCTTTGGTTTTGTCAAATTTGTTGGAATGGGCTGATTGTCCTGAACTTGGTGTTATTGGTGACATGTTGGCATCAAATAGTTTTGGTTCAAATTCTTCAATACTTGTTGTGCAACAATATGGATTTGGAGGTGTGCACTTTAAAACAAGTCCTCCAAATGATGATATTGAATCACTTTTCCCAAAGGGAGAATGA 2475 0.3661 MDAEEIARLTDAKLIDCYLNRIDNPGSIWNSENVLLLYLPNLIMQIFLVVVATRVMYGILRPLNQPHFVAELLAGFVLNIYIPIMDNTPFGMALKPKGILGFETLSQLGVIYYVFVTGLEMNLETLLRARKKASTIAIVGTIIPMILGFGIYFLVEKSFNKKNGEFNKISAYLLWSLVVTITSFPVVAHILSDLKILYTGLGRVALTSATINDFINWAMFIFLIPLIINGKRGIVSVILTIVFSNFCYFVIRPPLNKILVEKTEENEWDLYQLSYVLVGVIACATVTEFLGTHSVVGALIFGLILPRGKFTEMLIEQSEDIGSGYLAPLFFASIGMRSRVVPILHENIFLAIYIMILLICSKIVSAIVATRFYGMPIRDGMALGVIMNTKGILSLIILNIGWNRKVVSEEEFTIMVFSIFFMTVVVAPIINAMYKPRVTYEQNKLRTIENLKADSEIRVMACVHNVRQANGMIHFLEACNGPNVSLLHVFALQLVELKGRATALLVAQIDQRHQSSSLHNGLQIGDQSSDTNNYTSNHIANVFEEYSSNNANTLVESLVAMSSFSTIHRDIYNLALEKQASLVLLPFHKQNTAEGALEVADPGFRDINQNVMQDAPCSVGIFVDRGHHTSLFKTKMRILMIFIGGPDDREALAIAWRMSKHPWTRLTMVRILLCGKAAEVESKGYSEGEGLLSTVLDTEKQKEWDEEYVNSFRLKAVNNEDTITYAEREVHTDEDISEVLNELDKGGFDLHILGHGRGRNSLVLSNLLEWADCPELGVIGDMLASNSFGSNSSILVVQQYGFGGVHFKTSPPNDDIESLFPKGE 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02414 824 Pfam Sodium/hydrogen exchanger family 47 430 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre3g02414 824 PANTHER CATION/H + ANTIPORTER 32 800 - -
Trre3g02414 824 Gene3D - 40 442 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02414 Trre-Chr3 23157648 23161502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02414 10 800 Antiporter Super Family AT2G13620 36.000 4.39e-178 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02414 - - mtr:11442852 1186.4