Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g02412 ATGAATGAATCATGCAGAGCTATTGCATGTTTTTTGCTTATGAGTTTCTTCATTTTGAGTGTAGCTGAACCTATGAGGCCCCAACTGACTACAGATTTTTACAGAACAACATGCCCTGATCTTTGGACAATAGTTAGGACAGAGGTTCTTAATGCAATGAATGAAGAGATTCGAATTGCTGCTTCATTGCTTCGCCTTCATTTTCATGATTGTTTTGTAAATGGTTGTGATGGTTCCATTCTACTTGATGGCGACCAAGATAGTGAGAAATTTGCTACACCTAACTTGAATTCTGCAAGAGGATTTGAAGTGATAGATAGAATCAAAACTTCATTGGAGCATTCATGCAGTGGAATTGTGTCATGTGCTGATATATTAGCCATAGCTGCTAGAGATTCTGTATTCCTAAGTGGGGGTCCTTTTTGGTATGTTCAACAAGGACGCAGAGATGGATTTGTGTCAAATAAAACTCTGGCAAATCTTGCAATTCCTTCTCCATTTGATACACTAGATACAATCATATCTAAGTTTGATAATGTTGGACTTAACATCAAAGATGTTGTTACTTTATCAGGTGCCCACACAATTGGACGAGCAAGGTGCACATTTTTTAGCAACAGATTATTCAACTTTTCTGGCACAGAAGAACCAGACAATACTATAGAATATGAAATGCTTTCTGAATTACAAACTTTGTGTCCACAAGATGGAGATGGAAACACAACTACTGTTTTAGACCAAAACTCAATTGATCAATTTGATAACAATTACTTCAAAAATTTACTAAATGGAAAAGGTCTACTTAGCTCTGATCAAATTCTCTTTTCAAGTGATGAGGAAACCACTTCAACCACTAAACAATTGGTCACATCTTATAGTGATAATGAAAGATATTTTTTTATGGAATTTGCATATGCTATGATTAAGATGGGGAATATTAATCCACTTATTGGTTCTGAGGGAGAGATTAGGAAGAACTGTAGAGTGATTAATTCTTAA 999 0.3544 MNESCRAIACFLLMSFFILSVAEPMRPQLTTDFYRTTCPDLWTIVRTEVLNAMNEEIRIAASLLRLHFHDCFVNGCDGSILLDGDQDSEKFATPNLNSARGFEVIDRIKTSLEHSCSGIVSCADILAIAARDSVFLSGGPFWYVQQGRRDGFVSNKTLANLAIPSPFDTLDTIISKFDNVGLNIKDVVTLSGAHTIGRARCTFFSNRLFNFSGTEEPDNTIEYEMLSELQTLCPQDGDGNTTTVLDQNSIDQFDNNYFKNLLNGKGLLSSDQILFSSDEETTSTTKQLVTSYSDNERYFFMEFAYAMIKMGNINPLIGSEGEIRKNCRVINS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g02412 332 Pfam Peroxidase 45 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 FunFam Peroxidase 164 310 - -
Trre3g02412 332 CDD secretory_peroxidase 28 330 IPR033905 GO:0004601|GO:0042744
Trre3g02412 332 PANTHER PEROXIDASE 72-RELATED 23 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Trre3g02412 332 SUPERFAMILY Heme-dependent peroxidases 28 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 ProSiteProfiles Plant heme peroxidase family profile. 28 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 FunFam Peroxidase 32 200 - -
Trre3g02412 332 Gene3D Peroxidase, domain 2 164 310 - -
Trre3g02412 332 Gene3D - 33 331 - -
Trre3g02412 332 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Trre3g02412 332 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g02412 332 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g02412 Trre-Chr3 23144346 23147276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g02412 12 331 Peroxidase AT5G19890 60.938 9.25e-138 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g02412 K00430 - gmx:100817622 458.373